RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PARP15Q460N3 678 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 INO80DQ53TQ3 878 aaPredicted RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 TFDP3Q5H9I0 405 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 RABGAP1LQ5R372 815 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 CERCAMQ5T4B2 595 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 CACHD1Q5VU97 1274 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 SCYL2Q6P3W7 929 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 BBS12Q6ZW61 710 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PEX26Q7Z412 305 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 APLFQ8IW19 511 aaPredicted RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 APCDD1Q8J025 514 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 LGI2Q8N0V4 545 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 SLC35F6Q8N357 371 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 NPWQ8N729 165 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PAF1Q8N7H5 531 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 FAM76AQ8TAV0 307 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 ACTRT1Q8TDG2 376 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 KCNE4Q8WWG9 221 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 OR8D1Q8WZ84 308 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 ARHGEF2Q92974 986 aaKnown RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 TADA1Q96BN2 335 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 CTHRC1Q96CG8 243 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 HDAC11Q96DB2 347 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 RBM41Q96IZ5 413 aaKnown RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 RPRD1AQ96P16 312 aaPredicted RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 ALS2CR12Q96Q35 445 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 WDR24Q96S15 920 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 FAM118BQ9BPY3 351 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 FEM1AQ9BSK4 669 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 WACQ9BTA9 647 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PARD6BQ9BYG5 372 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 DHX35Q9H5Z1 703 aaKnown RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 CLMPQ9H6B4 373 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 POLR1BQ9H9Y6 1135 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 USP29Q9HBJ7 922 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 ETNK2Q9NVF9 386 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 GPATCH2LQ9NWQ4 482 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 TRMT1Q9NXH9 659 aaKnown RBP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 MPP6Q9NZW5 540 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 VPS18Q9P253 973 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 SNX12Q9UMY4 172 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 RABL2BQ9UNT1 228 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 HS3ST2Q9Y278 367 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PIEZO2Q9H5I5 2752 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 PTPN13Q12923 2485 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 HECTD1Q9ULT8 2610 aa4.74□□□□□ -1.65
KARSP3-201ENST00000571212 DOCK4Q8N1I0 1966 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 SYNJ2BP-COX16A0A087WUM0 186 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 A0A0D9SEW6 157 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 NEMP2A6NFY4 417 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 H3BQF6 201 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 PSMD9O00233 223 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 EEF2KO00418 725 aaKnown RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 MCF2LO15068 1137 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 KLK10O43240 276 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 KDELR3O43731 214 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 SPOPO43791 374 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 SHOX2O60902 331 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 USP12O75317 370 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 CSO75390 466 aaKnown RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 PIAS2O75928 621 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 RASAL1O95294 804 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 FTCDO95954 541 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 MOCS2O96007 188 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ATP1A1P05023 1023 aaKnown RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 THEGLP0DJG4 465 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 GIMD1P0DJR0 217 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ALPPL2P10696 532 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 TGM2P21980 687 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 MAT2AP31153 395 aaKnown RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 UQCRC1P31930 480 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 RANBP1P43487 201 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 STK19P49842 368 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 DIO1P49895 249 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 METAP1P53582 386 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ARF5P84085 180 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 GNA12Q03113 381 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 PPIDQ08752 370 aaKnown RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 CNTN1Q12860 1018 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ZNF177Q13360 481 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 XRCC4Q13426 336 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 RAB32Q13637 225 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 RPS6KA1Q15418 735 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 SEC23BQ15437 767 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 LRRC23Q53EV4 343 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 C3orf38Q5JPI3 329 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 BEND6Q5SZJ8 279 aaPredicted RBP4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ARMC3Q5W041 872 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 NEK5Q6P3R8 708 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 ZNF813Q6ZN06 617 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 B4GALNT4Q76KP1 1039 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 CEP112Q8N8E3 955 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 DCAF4L2Q8NA75 395 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
KARSP3-201ENST00000571212 HSPH1Q92598 858 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms