RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CLEC4FQ8N1N0 589 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TTC9BQ8N6N2 239 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 UBL4BQ8N7F7 174 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF366Q8N895 744 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SNX31Q8N9S9 440 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 UXS1Q8NBZ7 420 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 B3GALNT2Q8NCR0 500 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 KREMEN2Q8NCW0 462 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SRFBP1Q8NEF9 429 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 DBF4BQ8NFT6 615 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OR8J2Q8NGG1 315 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OR10Z1Q8NGY1 313 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OR2T3Q8NH03 318 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 BBS10Q8TAM1 723 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 NDNFQ8TB73 568 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF596Q8TC21 504 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC2A14Q8TDB8 520 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC35F5Q8WV83 523 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SELENOMQ8WWX9 145 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RXFP2Q8WXD0 754 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 IFT81Q8WYA0 676 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DLG3Q92796 817 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DVL3Q92997 716 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 MYLPFQ96A32 169 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MAGOHBQ96A72 148 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 MCUR1Q96AQ8 359 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ABHD8Q96I13 439 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 METTL2AQ96IZ6 378 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF479Q96JC4 524 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MRGPRX2Q96LB1 330 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MRGPRX1Q96LB2 322 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PWWP2AQ96N64 755 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF558Q96NG5 402 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 FOXN4Q96NZ1 517 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OPALINQ96PE5 141 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF317Q96PQ6 595 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 SMOQ99835 787 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 EGFL8Q99944 293 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SYT15Q9BQS2 421 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PIGQQ9BRB3 760 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CHID1Q9BWS9 393 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PHF7Q9BWX1 381 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 GON7Q9BXV9 100 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OSBPL8Q9BZF1 889 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 NDEL1Q9GZM8 345 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MKRN2Q9H000 416 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 RNF208Q9H0X6 261 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DNTTIP1Q9H147 329 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ADAM7Q9H2U9 754 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SAV1Q9H4B6 383 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 AUNIPQ9H7T9 357 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZNF395Q9H8N7 513 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 CNOT10Q9H9A5 744 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 GP6Q9HCN6 339 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MRPL47Q9HD33 250 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 DMAP1Q9NPF5 467 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 HEYLQ9NQ87 328 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 PAK6Q9NQU5 681 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 PRDM9Q9NQV7 894 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PNO1Q9NRX1 252 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 PNPLA3Q9NST1 481 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PARVAQ9NVD7 372 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 P4HTMQ9NXG6 502 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZDHHC3Q9NYG2 299 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 VSX1Q9NZR4 365 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 MGAT4CQ9UBM8 478 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DKK4Q9UBT3 224 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC25A10Q9UBX3 287 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 KCNN3Q9UGI6 736 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DCDC2Q9UHG0 476 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC24A2Q9UI40 661 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PADI1Q9ULC6 663 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PADI2Q9Y2J8 665 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SNX24Q9Y343 169 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SH3GLB1Q9Y371 365 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MFHAS1Q9Y4C4 1052 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SNX10Q9Y5X0 201 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 NUMBLQ9Y6R0 609 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TCF20Q9UGU0 1960 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 DOCK8Q8NF50 2099 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 hCG_1818297A0A087WSY0 165 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 A0A0B4J293 547 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GAGE10A6NGK3 116 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 A6NL46 340 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TRPC5OSA6NMA1 111 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HHLA1C9JL84 531 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FAM47E-STBD1D6RA91 191 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 I6L893 689 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 NRP1O14786 923 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HS3ST1O14792 307 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MATN3O15232 486 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 INPPL1O15357 1258 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 EFSO43281 561 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 LILRA1O75019 489 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ZNF623O75123 536 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 BANF1O75531 89 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms