RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 PPIL6Q8IXY8 311 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 KBTBD2Q8IY47 623 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 IMMP1LQ96LU5 166 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 LMF1Q96S06 567 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 YIPF2Q9BWQ6 316 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 VN1R1Q9GZP7 353 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 ZNF700Q9H0M5 742 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 ATG10Q9H0Y0 220 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 MKKSQ9NPJ1 570 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 C14orf105Q9NVL8 296 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 ASIC3Q9UHC3 531 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 DCHS2Q6V1P9 2916 aa13.11□□□□□ -0.31
GTF3C1-211ENST00000569653 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TP73O15350 636 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 ZBTB14O43829 449 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 AHSGP02765 367 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 SERPINA7P05543 415 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 IL1RNP18510 177 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 DCTP40126 519 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 ST13P50502 369 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TNFSF10P50591 281 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TDGF1P3P51864 188 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 PTK6Q13882 451 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 FAM53BQ14153 422 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TLR1Q15399 786 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 THEMIS2Q5TEJ8 643 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 TRMT10BQ6PF06 316 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 CNTN4Q8IWV2 1026 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 LMNTD2Q8IXW0 634 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 FAR1Q8WVX9 515 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 MOCOSQ96EN8 888 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 FAM167BQ9BTA0 163 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 SGPP1Q9BX95 441 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 CCDC68Q9H2F9 335 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 EPS8L2Q9H6S3 715 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 HCN3Q9P1Z3 774 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 RNF14Q9UBS8 474 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 CDC14AQ9UNH5 594 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 COMMD10Q9Y6G5 202 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 CREBBPQ92793 2442 aa13.1□□□□□ -0.31
GTF3C1-211ENST00000569653 KCNE1BA0A087WTH5 132 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 CCDC188H7C350 402 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 SGK494L7N484 410 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 EIF3FO00303 357 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 B3GALT4O96024 378 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 HEXBP07686 556 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 CDH1P12830 882 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 MEF2AQ02078 507 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 NAE1Q13564 534 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 IRAK1BP1Q5VVH5 260 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 AGTRAPQ6RW13 159 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 TMEM207Q6UWW9 146 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 PCGF5Q86SE9 256 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 OR1N1Q8NGS0 311 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 ZCCHC10Q8TBK6 192 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 LINGO1Q96FE5 620 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 C5orf34Q96MH7 638 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 NPAS2Q99743 824 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 OLFM1Q99784 485 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 TMEM184CQ9NVA4 438 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 TRMT6Q9UJA5 497 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 OSGIN2Q9Y236 505 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
GTF3C1-211ENST00000569653 ZNF860A6NHJ4 632 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 MAN1A2O60476 641 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 RDH16O75452 317 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 NSA2O95478 260 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 WDPCPO95876 746 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 ANXA5P08758 320 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 EDN3P14138 238 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 NPPBP16860 134 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 MST1P26927 711 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 KCNK10P57789 538 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 DR1Q01658 176 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 RPUSD3Q6P087 351 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 SLC26A11Q86WA9 606 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 ZNF740Q8NDX6 193 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 OR5T3Q8NGG3 340 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 PYCR2Q96C36 320 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms