RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 HAUS8Q9BT25 410 aa13.72□□□□□ -0.21
CMTM3-215ENST00000568477 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
CMTM3-215ENST00000568477 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-215ENST00000568477 SH2B3Q9UQQ2 575 aa13.72□□□□□ -0.21
CMTM3-215ENST00000568477 B3GNT3Q9Y2A9 372 aa13.72□□□□□ -0.21
CMTM3-215ENST00000568477 PSAT1Q9Y617 370 aa13.72□□□□□ -0.21
CMTM3-215ENST00000568477 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 SPTBN1Q01082 2364 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 FOXS1O43638 330 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 HPP00738 406 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 STATHP02808 62 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 HEXBP07686 556 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 ENO2P09104 434 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 CDH1P12830 882 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 CXCR2P25025 360 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 GRK3P35626 688 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 SLC26A3P40879 764 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 AVPR1BP47901 424 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 PGGT1BP53609 377 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 EMP2P54851 167 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 MRPS25P82663 173 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 CALCOCO2Q13137 446 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 PRR30Q53SZ7 412 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 DUPD1Q68J44 220 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 C8orf74Q6P047 294 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 MAATS1Q7Z4T9 603 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 VN1R4Q7Z5H5 301 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 STRA8Q7Z7C7 330 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 SLC26A11Q86WA9 606 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 ZBED8Q8IZ13 594 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 FBXL8Q96CD0 374 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 PDLIM5Q96HC4 596 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 AGAP4Q96P64 663 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 LRRC1Q9BTT6 524 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 FAM129AQ9BZQ8 928 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 LHPPQ9H008 270 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 DPH5Q9H2P9 285 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 MOCS1Q9NZB8 636 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 MAP10Q9P2G4 905 aa13.71□□□□□ -0.21
CMTM3-215ENST00000568477 MRPS2Q9Y399 296 aaKnown RBP13.71□□□□□ -0.21
CMTM3-215ENST00000568477 SHANK1Q9Y566 2161 aa13.71□□□□□ -0.22
CMTM3-215ENST00000568477 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 FAM95CA0A1B0GW59 222 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 IDSB3KWA1 339 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 PCDH17O14917 1159 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ATP8B1O43520 1251 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ZNF37AP17032 561 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 SAT1P21673 171 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 BCL6P41182 706 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 CBLBQ13191 982 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 SYT16Q17RD7 645 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ATG9BQ674R7 924 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ASPGQ86U10 573 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 LAPTM4BQ86VI4 370 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 CAMKVQ8NCB2 501 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 OR9A4Q8NGU2 314 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 OR56A3Q8NH54 315 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 C8orf44Q96CB5 159 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 SLC29A3Q9BZD2 475 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ZBTB20Q9HC78 741 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ZNF160Q9HCG1 818 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 WHRNQ9P202 907 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 ESPL1Q14674 2120 aa13.7□□□□□ -0.22
CMTM3-215ENST00000568477 NSG1A0A0A6YYJ2 146 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 FEZF1A0PJY2 475 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 CLEC18AA5D8T8 446 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 H0YIG0 161 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 RAD51CO43502 376 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 NSA2O95478 260 aaKnown RBP13.69□□□□□ -0.22
CMTM3-215ENST00000568477 GUCA1CO95843 209 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 NPPBP16860 134 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 GNLYP22749 145 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 TNFRSF8P28908 595 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 UQCRFS1P47985 274 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 CCR8P51685 355 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 TAS2R39P59534 338 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 VSNL1P62760 191 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
CMTM3-215ENST00000568477 Q0VFX4 171 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 ILF2Q12905 390 aaKnown RBP13.69□□□□□ -0.22
CMTM3-215ENST00000568477 CLEC18BQ6UXF7 455 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 Q6ZS92 163 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 CAPN12Q6ZSI9 719 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 NDUFAF7Q7L592 441 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 FAM26EQ8N5C1 309 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms