RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AQP12BA6NM10 295 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 A8MT66 165 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ANHXE9PGG2 379 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 H3BNX3 289 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 STX16-NPEPL1H3BU86 382 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 H7C4K7 107 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PSMD12O00232 456 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SDHDO14521 159 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 STX16O14662 325 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 RPP40O75818 363 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PDE5AO76074 875 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ABLIM3O94929 683 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TNFAIP8O95379 198 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 WISP3O95389 354 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MATN4O95460 622 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MLYCDO95822 493 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NUDT3O95989 172 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CHEK2O96017 543 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MT-CYBP00156 380 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NPPAP01160 153 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 IGLV3-27P01718 113 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PYGLP06737 847 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SERPINF2P08697 491 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CTSAP10619 480 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SAT1P21673 171 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PAX7P23759 505 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PSMA3P25788 255 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 YWHAQP27348 245 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 EPHA3P29320 983 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PIK3CGP48736 1102 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ALDH7A1P49419 539 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 HERVK_113P63132 956 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MPP1Q00013 466 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 RHDQ02161 417 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 BNIP2Q12982 314 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CTBP1Q13363 440 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 FASTKQ14296 549 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CSHL1Q14406 222 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF235Q14590 738 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 POLD3Q15054 466 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 RBBP5Q15291 538 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TYSND1Q2T9J0 566 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 LIN52Q52LA3 116 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MS4A13Q5J8X5 152 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NXNQ6DKJ4 435 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 AFTPHQ6ULP2 937 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CD300LGQ6UXG3 332 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF783Q6ZMS7 281 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ARPINQ7Z6K5 226 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SCD5Q86SK9 330 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PRIMA1Q86XR5 153 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 FAM90A1Q86YD7 464 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 HPS6Q86YV9 775 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 DENND6AQ8IWF6 608 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 AQP12AQ8IXF9 295 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF683Q8IZ20 524 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 LSMEM2Q8N112 164 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SLC39A11Q8N1S5 342 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PACRGLQ8N7B6 248 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CCNYL1Q8N7R7 359 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SPATA22Q8NHS9 363 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 STAG3L4Q8TBR4 150 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TRPC4APQ8TEL6 797 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SLC22A17Q8WUG5 538 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 HEXDCQ8WVB3 486 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PYDC1Q8WXC3 89 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 USP13Q92995 863 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM125Q96AQ2 219 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CLDN23Q96B33 292 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NXNL1Q96CM4 212 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 DTNBP1Q96EV8 351 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CDRT15Q96T59 188 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 DDX50Q9BQ39 737 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 AIFM2Q9BRQ8 373 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM175Q9BSA9 504 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 HAUS8Q9BT25 410 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 OSBPL11Q9BXB4 747 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ERVK-6Q9BXR3 956 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NUSAP1Q9BXS6 441 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MAGEH1Q9H213 219 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CCDC68Q9H2F9 335 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 WDR55Q9H6Y2 383 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 CWH43Q9H720 699 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 SUDS3Q9H7L9 328 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PAPOLBQ9NRJ5 636 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM30AQ9NV96 361 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MIOSQ9NXC5 875 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 GTSE1Q9NYZ3 720 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 ZDHHC8Q9ULC8 765 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 NDUFAF1Q9Y375 327 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 MTF2Q9Y483 593 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 COPG1Q9Y678 874 aaKnown RBP5.16□□□□□ -1.58
CAPN3-217ENST00000567817 EVPLQ92817 2033 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 TSC2P49815 1807 aa5.16□□□□□ -1.58
CAPN3-217ENST00000567817 PDCD11Q14690 1871 aaKnown RBP5.15□□□□□ -1.58
CAPN3-217ENST00000567817 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.58
CAPN3-217ENST00000567817 MIA3Q5JRA6 1907 aa5.15□□□□□ -1.58
CAPN3-217ENST00000567817 KAT6AQ92794 2004 aa5.15□□□□□ -1.58
CAPN3-217ENST00000567817 PRSS51A0A1B0GVH4 220 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms