RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	VAT1	Q99536	393 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	AIPL1	Q9NZN9	384 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	IMPACT	Q9P2X3	320 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	LIMA1	Q9UHB6	759 aa	Known RBP	12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	OR2A25	A4D2G3	310 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	OR14I1	A6ND48	311 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	TUBAL3	A6NHL2	446 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	WIPF1	O43516	503 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	PHF2	O75151	1096 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	PROSC	O94903	275 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	GOSR1	O95249	250 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	CYP1A2	P05177	515 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	PRSS56	P0CW18	603 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	EPX	P11678	715 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SKIL	P12757	684 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	HLCS	P50747	726 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	GEM	P55040	296 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	NDUFA9	Q16795	377 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	FILIP1L	Q4L180	1135 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SFT2D3	Q587I9	215 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	PRSS57	Q6UWY2	283 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	VSIG1	Q86XK7	387 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SLC22A15	Q8IZD6	547 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF567	Q8N184	647 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SLCO2A1	Q92959	643 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	RNASE6	Q93091	150 aa	Known RBP	12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	RERG	Q96A58	199 aa	Predicted RBP	12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	SMC6	Q96SB8	1091 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	APOL2	Q9BQE5	337 aa		12.9	□□□□□ -0.34
SMG1-213	ENST00000567737	TRIM64	A6NGJ6	449 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	TRIM64B	A6NI03	449 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	CLCA1	A8K7I4	914 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	ACOT7	O00154	380 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	CES2	O00748	559 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	FCHO1	O14526	889 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	TXNDC9	O14530	226 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	ANXA9	O76027	345 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	CMPK1	P30085	196 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	TRHR	P34981	398 aa	Predicted RBP	12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	ASCL1	P50553	236 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	SLC26A5	P58743	744 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	GPR85	P60893	370 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	HSPA14	Q0VDF9	509 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	FAM53B	Q14153	422 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	USP10	Q14694	798 aa	Known RBP	12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	E4F1	Q66K89	784 aa	Predicted RBP	12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	RTL6	Q6ICC9	239 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	YTHDF3	Q7Z739	585 aa	Known RBP	12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	DNAJC1	Q96KC8	554 aa	Known RBP	12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	YIPF4	Q9BSR8	244 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	DPH7	Q9BTV6	452 aa		12.89	□□□□□ -0.35
SMG1-213	ENST00000567737	OR2W5	A6NFC9	320 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737		F8W8V4	182 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737		H0YIG0	161 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737		H7C0S8	307 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	WDR1	O75083	606 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	XCR1	P46094	333 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	NR2C2	P49116	596 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	NR0B1	P51843	470 aa	Known RBP	12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	MLF1	P58340	268 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	PPIA	P62937	165 aa	Known RBP	12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	PLGLB1	Q02325	96 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	TYRO3	Q06418	890 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	ITIH4	Q14624	930 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	ODF2	Q5BJF6	829 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	C1orf185	Q5T7R7	199 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	RIPPLY2	Q5TAB7	128 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	KAZN	Q674X7	775 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	RANBP10	Q6VN20	620 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	PACS1	Q6VY07	963 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	MICALCL	Q6ZW33	695 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	PIANP	Q8IYJ0	282 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	KIF2B	Q8N4N8	673 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	ZNF511	Q8NB15	262 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	OR2A1	Q8NGT9	310 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	MCOLN3	Q8TDD5	553 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	ELP5	Q8TE02	316 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	RAD51AP1	Q96B01	352 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	PIP5K1A	Q99755	562 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	SH3GL2	Q99962	352 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	TLN2	Q9Y4G6	2542 aa		12.88	□□□□□ -0.35
SMG1-213	ENST00000567737	CHD3	Q12873	2000 aa	Known RBP	12.88	□□□□□ -0.35
SMG1-213	ENST00000567737		A0A0U1RQJ8	604 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	C3orf70	A6NLC5	250 aa	Predicted RBP	12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	DVL2	O14641	736 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	UBE2H	P62256	183 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	POU4F3	Q15319	338 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	NSDHL	Q15738	373 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	VRK3	Q8IV63	474 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	CYP4Z2P	Q8N1L4	340 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	ARHGEF39	Q8N4T4	335 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	OR9A4	Q8NGU2	314 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	OR51Q1	Q8NH59	317 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	HMGCLL1	Q8TB92	370 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	MRPS30	Q9NP92	439 aa	Known RBP	12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	ALKBH4	Q9NXW9	302 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	CTTNBP2NL	Q9P2B4	639 aa		12.87	□□□□□ -0.35
SMG1-213	ENST00000567737	SAE1	Q9UBE0	346 aa	Predicted RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms