RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 FNDC3BQ53EP0 1204 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 C22orf42Q6IC83 251 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 NCEH1Q6PIU2 408 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ADGRG5Q8IZF4 528 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 GJD3Q8N144 294 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CADM2Q8N3J6 435 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 MFSD2AQ8NA29 543 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 MAELQ96JY0 434 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC35G5Q96KT7 338 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PTPN18Q99952 460 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CCDC32Q9BV29 185 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ANXA2P2A6NMY6 339 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 GNB5O14775 395 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ANXA2P07355 339 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC35G4P0C7Q5 338 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SPATA31D3P0C874 917 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CELP19835 753 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SMSP52788 366 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CDK5R2Q13319 367 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 TMEM44Q2T9K0 475 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 UAP1L1Q3KQV9 507 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC36A3Q495N2 470 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZNF648Q5T619 568 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ATG9BQ674R7 924 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SHQ1Q6PI26 577 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 C15orf39Q6ZRI6 1047 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SPATA31D4Q6ZUB0 917 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 METTL3Q86U44 580 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SCRN2Q96FV2 425 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC30A3Q99726 388 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 GPR83Q9NYM4 423 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 MAGED1Q9Y5V3 778 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZNF487B1APH4 448 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 TREHO43280 583 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 FCER2P06734 321 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SRPRAP08240 638 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PRKACAP17612 351 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 KDELR2P33947 212 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CDH11P55287 796 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 INCA1Q0VD86 236 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 RAB12Q6IQ22 244 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 KLHL24Q6TFL4 600 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 LBX2Q6XYB7 198 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 IQCHQ86VS3 1027 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CREB3L1Q96BA8 519 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 FAM129BQ96TA1 746 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 MMP28Q9H239 520 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CCSER2Q9H7U1 834 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 AGPAT4Q9NRZ5 378 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 BAZ2AQ9UIF9 1905 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC9A3R1O14745 358 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 STBD1O95210 358 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 TGFB1P01137 390 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 BCHEP06276 602 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 GRM2Q14416 872 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 FGFBP1Q14512 234 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PLA2G4EQ3MJ16 856 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZNF767PQ75MW2 155 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PRSS48Q7RTY5 328 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CARM1Q86X55 608 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 TP53INP2Q8IXH6 220 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 CNDP2Q96KP4 475 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ABCG5Q9H222 651 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZCCHC3Q9NUD5 404 aaKnown RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 RABL2AQ9UBK7 228 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 NENFQ9UMX5 172 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PCDHGA8Q9Y5G5 932 aa12.04□□□□□ -0.48
CSPG4P13-202ENST00000567704 PLATP00750 562 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 HK1P19367 917 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 AVPR1BP47901 424 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 INHBCP55103 352 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SPHARQ15513 63 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 NOXA1Q86UR1 476 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SIAH1Q8IUQ4 282 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SAMD12Q8N8I0 201 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 RFT1Q96AA3 541 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 NANSQ9NR45 359 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 OSER1Q9NX31 292 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 STOX2Q9P2F5 926 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 CKLFQ9UBR5 152 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 GTF2IRD1Q9UHL9 959 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 A0A1B0GVM2 712 aa12.03□□□□□ -0.48
CSPG4P13-202ENST00000567704 TCRBV3S1A0A5B6 114 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms