RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, human

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHCBP1-206	ENST00000567698	IGSF1	Q8N6C5	1336 aa		4.11	□□□□□ -1.75
SHCBP1-206	ENST00000567698	MYH15	Q9Y2K3	1946 aa		4.11	□□□□□ -1.75
SHCBP1-206	ENST00000567698	NME6	O75414	186 aa	Predicted RBP	4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	MYL6B	P14649	208 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	RPL35A	P18077	110 aa	Known RBP	4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	SLC6A12	P48065	614 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	XG	P55808	180 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	PMP22	Q01453	160 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	SCN1B	Q07699	218 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	IL10RB	Q08334	325 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	PTK6	Q13882	451 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TMEM132D	Q14C87	1099 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	CEP85L	Q5SZL2	805 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	KLHL10	Q6JEL2	608 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	SLC24A5	Q71RS6	500 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	PIGW	Q7Z7B1	504 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	NHLRC2	Q8NBF2	726 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	OR2T6	Q8NHC8	308 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	METTL21A	Q8WXB1	218 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	MAGED4	Q96JG8	741 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	BTBD9	Q96Q07	612 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	NKX3-1	Q99801	234 aa	Predicted RBP	4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	CLEC7A	Q9BXN2	247 aa		4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698	HBS1L	Q9Y450	684 aa	Known RBP	4.1	□□□□□ -1.75
SHCBP1-206	ENST00000567698		A0A0B4J203	849 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698		A4D1N5	150 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	YDJC	A8MPS7	323 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	KRTAP16-1	A8MUX0	517 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TMEM150C	B9EJG8	249 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ECE2	O60344	883 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	C9	P02748	559 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ZSCAN5DP	P0CG00	497 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	RBMS1	P29558	406 aa	Known RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	SFTPD	P35247	375 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	DRP2	Q13474	957 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TAB1	Q15750	504 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TYSND1	Q2T9J0	566 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	C1QTNF12	Q5T7M4	302 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	FAM46C	Q5VWP2	391 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TTC27	Q6P3X3	843 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ZNF497	Q6ZNH5	498 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	MSANTD1	Q6ZTZ1	278 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	OTOA	Q7RTW8	1153 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	RAB42	Q8N4Z0	105 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ZNF614	Q8N883	585 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	WBP2	Q969T9	261 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	SGF29	Q96ES7	293 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	BSCL2	Q96G97	398 aa	Predicted RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	POM121L2	Q96KW2	1035 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	NEDD4L	Q96PU5	975 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	KRT12	Q99456	494 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	PARK7	Q99497	189 aa	Known RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TDRD1	Q9BXT4	1180 aa	Known RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	VPS33B	Q9H267	617 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	TBC1D13	Q9NVG8	400 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	IL36A	Q9UHA7	158 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	NOCT	Q9UK39	431 aa	Known RBP	4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	FBXL4	Q9UKA2	621 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ITGA11	Q9UKX5	1188 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	CDH7	Q9ULB5	785 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	PPP1R3C	Q9UQK1	317 aa		4.09	□□□□□ -1.75
SHCBP1-206	ENST00000567698	ANTXRL	A6NF34	631 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	NTN3	O00634	580 aa	Predicted RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	SAP30	O75446	220 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	GAS8-AS1	O95177	125 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	DUS4L	O95620	317 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	RPN1	P04843	607 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ELAVL4	P26378	380 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	NEDD4	P46934	1319 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	CLK1	P49759	484 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	CLDN17	P56750	224 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	DCDC1	P59894	354 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	KRT83	P78385	493 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	POU5F1	Q01860	360 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	FOLH1	Q04609	750 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	CDH18	Q13634	790 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	NHSL2	Q5HYW2	709 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	LCE1F	Q5T754	118 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	PODNL1	Q6PEZ8	512 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	FCRLA	Q7L513	359 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	PRUNE1	Q86TP1	453 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	MEX3D	Q86XN8	651 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	TDH	Q8IZJ6	230 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	GBP7	Q8N8V2	638 aa	Predicted RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	CCDC63	Q8NA47	563 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ATAD1	Q8NBU5	361 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ZNF248	Q8NDW4	579 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	FIBIN	Q8TAL6	211 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	CCDC114	Q96M63	670 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	AK8	Q96MA6	479 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	JAKMIP1	Q96N16	626 aa	Known RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	OPRPN	Q99935	248 aa	Predicted RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	OVOL2	Q9BRP0	275 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	UBQLN3	Q9H347	655 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	ZWILCH	Q9H900	591 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	GRPEL1	Q9HAV7	217 aa		4.08	□□□□□ -1.76
SHCBP1-206	ENST00000567698	PANK4	Q9NVE7	773 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms