RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 APOLD1Q96LR9 279 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 PANX1Q96RD7 426 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 BBS2Q9BXC9 721 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 REXO4Q9GZR2 422 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 SFXN1Q9H9B4 322 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 ABCG2Q9UNQ0 655 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CORO2BQ9UQ03 480 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 RUVBL1Q9Y265 456 aaKnown RBP16.21■□□□□ 0.19
CMTM3-213ENST00000566756 PCDHGA10Q9Y5H3 936 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 CEP290O15078 2479 aa16.21■□□□□ 0.19
CMTM3-213ENST00000566756 MAGEB17A8MXT2 336 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 J3QRK9 145 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 AP2A2O94973 939 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 ABCB1P08183 1280 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 ATP1B2P14415 290 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 ENGP17813 658 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 OPRL1P41146 370 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SPINT3P49223 89 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 WNT3P56703 355 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 RELAQ04206 551 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SLC14A1Q13336 389 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 RAB30Q15771 203 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 NPTX1Q15818 432 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 UGT8Q16880 541 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 ZCCHC8Q6NZY4 707 aaKnown RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 FAHD1Q6P587 224 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CEP68Q76N32 757 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 KIAA0907Q7Z7F0 614 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SYT12Q8IV01 421 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CEP44Q9C0F1 390 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CCDC90BQ9GZT6 254 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 LINC00597Q9H2U6 94 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 ANKHQ9HCJ1 492 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 FBXO8Q9NRD0 319 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 GMPPBQ9Y5P6 360 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 NEDD8-MDP1E9PL57 170 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 XPNPEP2O43895 674 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 MITFO75030 526 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 TYRP14679 529 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 EFNA1P20827 205 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 LHCGRP22888 699 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CD6P30203 668 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 LRRC74AQ0VAA2 488 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 HSPA14Q0VDF9 509 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 MAD2L1BPQ15013 274 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 DGUOKQ16854 277 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 PROX2Q3B8N5 592 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 KIAA1614Q5VZ46 1190 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 PRSS48Q7RTY5 328 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CAMKMTQ7Z624 323 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 HORMAD1Q86X24 394 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 PTOV1Q86YD1 416 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 TTC29Q8NA56 475 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 WDR20Q8TBZ3 569 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 EGLN2Q96KS0 407 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 FAM83CQ9BQN1 747 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 MROQ9BYG7 248 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 RIBC2Q9H4K1 309 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 BRF2Q9HAW0 419 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SPATA6Q9NWH7 488 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-213ENST00000566756 BTNL2Q9UIR0 455 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 SLC22A14Q9Y267 594 aa16.2■□□□□ 0.18
CMTM3-213ENST00000566756 PRAMEF4O60810 478 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 FUCA1P04066 466 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 C1SP09871 688 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 PABPC1P11940 636 aaKnown RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 ST13P50502 369 aaKnown RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 PFN3P60673 137 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 CHIT1Q13231 466 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 GTF2H3Q13889 308 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 LY6G5CQ5SRR4 150 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 PRAMEF9Q5VWM5 478 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 C22orf39Q6P5X5 142 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 SYNPOQ8N3V7 929 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 PHF10Q8WUB8 498 aaKnown RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 ING5Q8WYH8 240 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 C11orf24Q96F05 449 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 ZNF300Q96RE9 604 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-213ENST00000566756 SIGLEC11Q96RL6 698 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 EPYCQ99645 322 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 P2RY13Q9BPV8 354 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 EPS8L2Q9H6S3 715 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 REEP1Q9H902 201 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 DZANK1Q9NVP4 752 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 ERVK-18Q9QC07 812 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 PCDHB11Q9Y5F2 797 aa16.19■□□□□ 0.18
CMTM3-213ENST00000566756 QSOX1O00391 747 aa16.18■□□□□ 0.18
CMTM3-213ENST00000566756 RGS10O43665 173 aa16.18■□□□□ 0.18
CMTM3-213ENST00000566756 POP4O95707 220 aaKnown RBP16.18■□□□□ 0.18
CMTM3-213ENST00000566756 BMP1P13497 986 aa16.18■□□□□ 0.18
CMTM3-213ENST00000566756 ZNF30P17039 623 aa16.18■□□□□ 0.18
CMTM3-213ENST00000566756 IDUAP35475 653 aa16.18■□□□□ 0.18
CMTM3-213ENST00000566756 HNF4AP41235 474 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms