RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 EMP2P54851 167 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 ARL4CP56559 192 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 IL2P60568 153 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 RPS15AP62244 130 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 FASTKD3Q14CZ7 662 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 NDUFA9Q16795 377 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 EIF2S3LQ2VIR3 472 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 TMEM207Q6UWW9 146 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 ISLR2Q6UXK2 745 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 LINC00696Q6ZRV3 163 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 NDUFAF7Q7L592 441 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 C17orf64Q86WR6 236 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 KCT2Q8NC54 265 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 PSMF1Q92530 271 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 ALKBH8Q96BT7 664 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 PYCR2Q96C36 320 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 LRRC39Q96DD0 335 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 SNF8Q96H20 258 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 VPS50Q96JG6 964 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 RUNDC3BQ96NL0 473 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 OR4K3Q96R72 315 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 BARD1Q99728 777 aaKnown RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 PCBD2Q9H0N5 130 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 CORO1CQ9ULV4 474 aaPredicted RBP9.51□□□□□ -0.89
CMTM3-209ENST00000565003 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
CMTM3-209ENST00000565003 LOC102723996A0A087X1L8 192 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 H0YIG0 161 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 LCMT2O60294 686 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 BMP10O95393 424 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 NSA2O95478 260 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 HIST1H2AGP0C0S8 130 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 GP1BBP13224 206 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ZNF37AP17032 561 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 HIST1H2ADP20671 130 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 CCND1P24385 295 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 SOX11P35716 441 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 RPL21P46778 160 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 AVPR1BP47901 424 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 MRPS25P82663 173 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 MEF2AQ02078 507 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 PDIA2Q13087 525 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 MFAP5Q13361 173 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 FRG1Q14331 258 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 PCOLCEQ15113 449 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 CAPN13Q6MZZ7 669 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 FAM45BPQ6NSW5 357 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 LCTLQ6UWM7 567 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 SBSNQ6UWP8 590 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ASPGQ86U10 573 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 SLC26A11Q86WA9 606 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ZC3HC1Q86WB0 502 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 PDSS2Q86YH6 399 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 KBTBD2Q8IY47 623 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 FBXO36Q8NEA4 188 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 OR56A3Q8NH54 315 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 PRR7Q8TB68 274 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ZCCHC10Q8TBK6 192 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 DNAJB14Q8TBM8 379 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 FAM45AQ8TCE6 357 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 BRIX1Q8TDN6 353 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 TM4SF19Q96DZ7 209 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 HIST1H2AHQ96KK5 128 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 CNDP1Q96KN2 507 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 HIST1H2AJQ99878 128 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 H2AFJQ9BTM1 129 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 VN1R1Q9GZP7 353 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 EPS8L2Q9H6S3 715 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ARL15Q9NXU5 204 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 HCN3Q9P1Z3 774 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 VWA7Q9Y334 891 aa9.5□□□□□ -0.89
CMTM3-209ENST00000565003 COPG1Q9Y678 874 aaKnown RBP9.5□□□□□ -0.89
CMTM3-209ENST00000565003 EFCAB8A8MWE9 144 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 E7ESA3 106 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 CCDC188H7C350 402 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 SGK494L7N484 410 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 RDH16O75452 317 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 GUCA1CO95843 209 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 SERPINA7P05543 415 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 CXCR2P25025 360 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 PAFAH1B1P43034 410 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 TSFMP43897 325 aaKnown RBP9.49□□□□□ -0.89
CMTM3-209ENST00000565003 XCR1P46094 333 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 AP1S2P56377 157 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 MGAT5Q09328 741 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 ZNF460Q14592 562 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 ZNF169Q14929 603 aaPredicted RBP9.49□□□□□ -0.89
CMTM3-209ENST00000565003 TLR1Q15399 786 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 PPP1R3AQ16821 1122 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 CATSPEREQ5SY80 951 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 DUPD1Q68J44 220 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 HIST2H2BCQ6DN03 193 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 TMEM205Q6UW68 189 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 LANCL3Q6ZV70 420 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
CMTM3-209ENST00000565003 MFSD9Q8NBP5 474 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms