RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PTCD3Q96EY7 689 aaKnown RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 GPR87Q9BY21 358 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 PITHD1Q9GZP4 211 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 IQCGQ9H095 443 aaKnown RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 LOC101059948A0A1B0GTJ6 334 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 A0A1B0GX78 115 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 C21orf140B9A014 251 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 STX16-NPEPL1H3BU86 382 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 STX16O14662 325 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 DSCR3O14972 297 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 SLC35G6P0C7Q6 338 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 AHRP35869 848 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 BCL6P41182 706 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CHIT1Q13231 466 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 PRTGQ2VWP7 1150 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CCDC153Q494R4 210 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 C16orf46Q6P387 395 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 TMIGD1Q6UXZ0 262 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 ASPGQ86U10 573 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CCDC63Q8NA47 563 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 TRPV3Q8NET8 790 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 TTLQ8NG68 377 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 PPP4R1Q8TF05 950 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 EFCAB11Q9BUY7 163 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 SARGQ9BW04 601 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 FAM117AQ9C073 453 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CHST8Q9H2A9 424 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CENPHQ9H3R5 247 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 EHD1Q9H4M9 534 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 ENAMQ9NRM1 1142 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 IFT80Q9P2H3 777 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-208ENST00000564703 LGALS13Q9UHV8 139 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 ZFP69BQ9UJL9 534 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 CROTQ9UKG9 612 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 FARSAQ9Y285 508 aaKnown RBP15.25■□□□□ 0.03
RAB40C-208ENST00000564703 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
RAB40C-208ENST00000564703 URADA6NGE7 173 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 ANKDD1BA6NHY2 528 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 FOXO6A8MYZ6 492 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 TK2O00142 265 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 RGS16O15492 202 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 LIFP15018 202 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 VARSP26640 1264 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 EEF1DP29692 281 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 CRHR1P34998 444 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 RORAP35398 523 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 ARL1P40616 181 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 MC1RQ01726 317 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 RGS1Q08116 209 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 DNASE1L3Q13609 305 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 PWP1Q13610 501 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 GTF2H2Q13888 395 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 DOC2AQ14183 400 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 NKAIN1Q4KMZ8 207 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 CEP85LQ5SZL2 805 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 MLIPQ5VWP3 458 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 GTF2H2CQ6P1K8 395 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 PRMT9Q6P2P2 845 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 MYLK4Q86YV6 388 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 SLC22A9Q8IVM8 553 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 SRRM1Q8IYB3 904 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 IQCKQ8N0W5 287 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 C4orf33Q8N1A6 199 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 ZNF740Q8NDX6 193 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 CT55Q8WUE5 264 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 UBE2E3Q969T4 207 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 COL26A1Q96A83 441 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 CCDC126Q96EE4 140 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 SMC6Q96SB8 1091 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 NT5DC2Q9H857 520 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 IPPKQ9H8X2 491 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 AKIRIN1Q9H9L7 192 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 ZNF304Q9HCX3 659 aa15.24■□□□□ 0.03
RAB40C-208ENST00000564703 ARGLU1Q9NWB6 273 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 GEMIN8Q9NWZ8 242 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 RUVBL1Q9Y265 456 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 MAP1BP46821 2468 aaKnown RBP15.24■□□□□ 0.03
RAB40C-208ENST00000564703 PRPF4O43172 522 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAB40C-208ENST00000564703 SIX3O95343 332 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-208ENST00000564703 RAB40ALP0C0E4 278 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 MYZAPP0CAP1 466 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 ATP5F1P24539 256 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-208ENST00000564703 GSTM2P28161 218 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 HPDP32754 393 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-208ENST00000564703 CASP2P42575 452 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 SCTRP47872 440 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 AVPR1BP47901 424 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 REEP5Q00765 189 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 VAC14Q08AM6 782 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 SLBPQ14493 270 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAB40C-208ENST00000564703 TBCCQ15814 346 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 HKDC1Q2TB90 917 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 C19orf48Q6RUI8 117 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 TRABD2AQ86V40 505 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 CCT6BQ92526 530 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 TM4SF19Q96DZ7 209 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 MVB12AQ96EY5 273 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 RUFY1Q96T51 708 aa15.23■□□□□ 0.03
RAB40C-208ENST00000564703 YIPF2Q9BWQ6 316 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms