RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ABHD11Q8NFV4 315 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 CRB3Q9BUF7 120 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 UNKQ9C0B0 810 aaKnown RBP17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 TRPC4Q9UBN4 977 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 ZNF451Q9Y4E5 1061 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 NUP210LQ5VU65 1888 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 PCSK5Q92824 1860 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 LCMT2O60294 686 aaKnown RBP17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 FAM155BO75949 473 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 C1QAP02745 245 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 PDGFAP04085 211 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 SLC26A3P40879 764 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 CASRP41180 1078 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 BCL6P41182 706 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 RAB10P61026 200 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 MEF2AQ02078 507 aaPredicted RBP17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 KLC1Q07866 573 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 DSG2Q14126 1118 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 VWA2Q5GFL6 755 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 RAPH1Q70E73 1250 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 VN1R4Q7Z5H5 301 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 ASPGQ86U10 573 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 THOC6Q86W42 341 aaKnown RBP17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 SPATA6LQ8N4H0 392 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 ARHGEF39Q8N4T4 335 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 MFSD9Q8NBP5 474 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 NOA1Q8NC60 698 aaKnown RBP17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 OR4K1Q8NGD4 311 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 SLC13A3Q8WWT9 602 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 SLC5A11Q8WWX8 675 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 IFT81Q8WYA0 676 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 NEIL2Q969S2 332 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 TSNARE1Q96NA8 513 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 TSPYL1Q9H0U9 437 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 MLXIPLQ9NP71 852 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 ATP13A2Q9NQ11 1180 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 GPR83Q9NYM4 423 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 SLC22A14Q9Y267 594 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 PCDHGB7Q9Y5F8 929 aa17.44■□□□□ 0.38
SYNGR3-204ENST00000564642 FOXS1O43638 330 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 OR1F1O43749 312 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 KLHL41O60662 606 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 WISP3O95389 354 aaPredicted RBP17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 SLC35G6P0C7Q6 338 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 PHBP35232 272 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 ATP6V0D1P61421 351 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 RAPSNQ13702 412 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 SLMAPQ14BN4 828 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 TGFBIQ15582 683 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 CATSPEREQ5SY80 951 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 TM4SF19Q96DZ7 209 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 MACROD1Q9BQ69 325 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 NUDT9Q9BW91 350 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 TRIM4Q9C037 500 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 MKKSQ9NPJ1 570 aaPredicted RBP17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 C14orf105Q9NVL8 296 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 C3orf18Q9UK00 162 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 MAP4K5Q9Y4K4 846 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 HS3ST3B1Q9Y662 390 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 KCNE2Q9Y6J6 123 aa17.43■□□□□ 0.38
SYNGR3-204ENST00000564642 SCN3AQ9NY46 2000 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 IGLV3-12A0A075B6K2 115 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 TRBC2A0A5B9 178 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 NCF1BA6NI72 391 aaPredicted RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 NCF1CA8MVU1 366 aaPredicted RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 SOCS6O14544 535 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 FFAR3O14843 346 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 GPR42O15529 346 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 WDR47O94967 919 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 NCF1P14598 390 aaPredicted RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 CD1DP15813 335 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 EMP2P54851 167 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 TLE1Q04724 770 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 AIMP2Q13155 320 aaKnown RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 EFTUD2Q15029 972 aaKnown RBP eCLIP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 ZKSCAN8Q15776 578 aaPredicted RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 LAPTM4BQ86VI4 370 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 GPSM1Q86YR5 675 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 TCAIMQ8N3R3 496 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 GALNT16Q8N428 558 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 CEP112Q8N8E3 955 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 AMER3Q8N944 861 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 OR9A4Q8NGU2 314 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 RHBDF1Q96CC6 855 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 MRRFQ96E11 262 aaKnown RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 SARGQ9BW04 601 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 ANKHQ9HCJ1 492 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 FBXL4Q9UKA2 621 aa17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 MRPS2Q9Y399 296 aaKnown RBP17.42■□□□□ 0.38
SYNGR3-204ENST00000564642 H0YIG0 161 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 PYCARD-AS1I3L0S3 204 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 NSA2O95478 260 aaKnown RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 SERPIND1P05546 499 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 HEXBP07686 556 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 CRABP2P29373 138 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 UAP1Q16222 522 aaPredicted RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 SYT16Q17RD7 645 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 TUBB8Q3ZCM7 444 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 COLEC12Q5KU26 742 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms