RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ASPGQ86U10 573 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 PTRH1Q86Y79 214 aaKnown RBP13.01□□□□□ -0.33
CNOT1-206ENST00000564557 RELL1Q8IUW5 271 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 STAG3L4Q8TBR4 150 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 SLC13A3Q8WWT9 602 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 EXT2Q93063 718 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 NACC2Q96BF6 587 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 C10orf90Q96M02 699 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 AIF1LQ9BQI0 150 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 CRB3Q9BUF7 120 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 CAPS2Q9BXY5 557 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 SLC26A1Q9H2B4 701 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 CDC42EP4Q9H3Q1 356 aaKnown RBP13.01□□□□□ -0.33
CNOT1-206ENST00000564557 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 SLC22A11Q9NSA0 550 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 ACOT9Q9Y305 439 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
CNOT1-206ENST00000564557 A0A087X1B8 175 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 A0A0A6YYC8 382 aaPredicted RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 A6NL46 340 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 I3L1I5 382 aaPredicted RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 SLC28A2O43868 658 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 DNAJB5O75953 348 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 STATHP02808 62 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 RHOXF2BP0C7M4 288 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CD1DP15813 335 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 GNAZP19086 355 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 MMP11P24347 488 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CXCR2P25025 360 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 TYK2P29597 1187 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 PGDP52209 483 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 SKP1P63208 163 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 RGS1Q08116 209 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 RBBP5Q15291 538 aaKnown RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 ZKSCAN8Q15776 578 aaPredicted RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 CATSPEREQ5SY80 951 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 IRAK1BP1Q5VVH5 260 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CPZQ66K79 652 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 ASB18Q6ZVZ8 466 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 MRGPREQ86SM8 312 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 PRSS58Q8IYP2 241 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 TEX19Q8NA77 164 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 MFSD9Q8NBP5 474 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 ABHD11Q8NFV4 315 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 STT3BQ8TCJ2 826 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 NEIL2Q969S2 332 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 RHOXF2Q9BQY4 288 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 TRIM55Q9BYV6 548 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 PELI2Q9HAT8 420 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 ANKHQ9HCJ1 492 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 MKKSQ9NPJ1 570 aaPredicted RBP13□□□□□ -0.33
CNOT1-206ENST00000564557 SEMA3GQ9NS98 782 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CTSFQ9UBX1 484 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 SH2B3Q9UQQ2 575 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 TP53TG5Q9Y2B4 290 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 CCDC88CQ9P219 2028 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 LOC400499M0QZD8 3231 aa13□□□□□ -0.33
CNOT1-206ENST00000564557 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 A0A087WUV0 522 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-206ENST00000564557 TRBC2A0A5B9 178 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 URADA6NGE7 173 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 CLGNO14967 610 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 P2RX6O15547 441 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 NDUFS4O43181 175 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 LCMT2O60294 686 aaKnown RBP12.99□□□□□ -0.33
CNOT1-206ENST00000564557 CNOT3O75175 753 aaKnown RBP12.99□□□□□ -0.33
CNOT1-206ENST00000564557 IPO13O94829 963 aaKnown RBP12.99□□□□□ -0.33
CNOT1-206ENST00000564557 MED26O95402 600 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 C1QAP02745 245 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
CNOT1-206ENST00000564557 ZGLP1P0C6A0 271 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 SLC26A3P40879 764 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 BCL6P41182 706 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 MSH2P43246 934 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 CDKL4Q5MAI5 379 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 KLC3Q6P597 504 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 NXPE4Q6UWF7 544 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 ATG14Q6ZNE5 492 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 COX15Q7KZN9 410 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 DTWD1Q8N5C7 304 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 SNX31Q8N9S9 440 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 ZCCHC10Q8TBK6 192 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 KIAA1191Q96A73 305 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 UBXN10Q96LJ8 280 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 OR4K3Q96R72 315 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 SPSB2Q99619 263 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 MACROD1Q9BQ69 325 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 ALG9Q9H6U8 611 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 ATP13A2Q9NQ11 1180 aa12.99□□□□□ -0.33
CNOT1-206ENST00000564557 C14orf105Q9NVL8 296 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms