RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CARS2Q9HA77 564 aaKnown RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 EFCAB1Q9HAE3 211 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 NMRK1Q9NWW6 199 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ASIC5Q9NY37 505 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TAS2R1Q9NYW7 299 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 SLC23A2Q9UGH3 650 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TMED5Q9Y3A6 229 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 RNF11Q9Y3C5 154 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 PRKAB1Q9Y478 270 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 PCYT1BQ9Y5K3 369 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ENTPD2Q9Y5L3 495 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 COLEC10Q9Y6Z7 277 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PCM1Q15154 2024 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 A0A1W2PQM1 296 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 EME2A4GXA9 379 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PDZK1P1A8MUH7 402 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 NPIPB8E9PQR5 432 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 LMO7DNF2Z398 122 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 H0YIV9 168 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 MANBAO00462 879 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 LSM1O15116 133 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PEX11AO75192 247 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 WFS1O76024 890 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SNRPB2P08579 225 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SLC2A4P14672 509 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PRPH2P23942 346 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 CXCR2P25025 360 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SERPINB1P30740 379 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 BLKP51451 505 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 GABREP78334 506 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 TLE3Q04726 772 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ILF3Q12906 894 aaKnown RBP eCLIP9.38□□□□□ -0.911e-9■■■■□ 24.3
UBFD1-203ENST00000564106 CUL3Q13618 768 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 CPSF6Q16630 551 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ISXQ2M1V0 245 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 MMEL1Q495T6 779 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 XKR6Q5GH73 641 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 COQ5Q5HYK3 327 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 C3orf38Q5JPI3 329 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 C6orf136Q5SQH8 315 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 THEMIS2Q5TEJ8 643 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 CACHD1Q5VU97 1274 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PRAMEF13Q5VWM6 474 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 FRG2Q64ET8 278 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ZCCHC8Q6NZY4 707 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 RD3Q7Z3Z2 195 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SNX32Q86XE0 403 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 HID1Q8IV36 788 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SPACA3Q8IXA5 215 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PCYOX1LQ8NBM8 494 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 RBM15BQ8NDT2 890 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 OR5AR1Q8NGP9 310 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SELENOMQ8WWX9 145 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SMPDL3AQ92484 453 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 C12orf66Q96MD2 445 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 FRG2BQ96QU4 278 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PITHD1Q9GZP4 211 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 INTS7Q9NVH2 962 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 AIG1Q9NVV5 245 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 ADGRE2Q9UHX3 823 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 PSMD13Q9UNM6 376 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 SATB2Q9UPW6 733 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 MAPRE3Q9UPY8 281 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 EIF3LQ9Y262 564 aaKnown RBP9.38□□□□□ -0.91
UBFD1-203ENST00000564106 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 DGKBQ9Y6T7 804 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 AHCTF1Q8WYP5 2266 aa9.38□□□□□ -0.91
UBFD1-203ENST00000564106 UNC13CQ8NB66 2214 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 E7ENX8 843 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 FFAR3O14843 346 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 GSC2O15499 205 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 GPR42O15529 346 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 RASGRP1O95267 797 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 TNFP01375 233 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 ALDOCP09972 364 aaKnown RBP9.37□□□□□ -0.91
UBFD1-203ENST00000564106 PRPS2P11908 318 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 EPORP19235 508 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 PGM1P36871 562 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 NUDT2P50583 147 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 RAB28P51157 221 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 KCNK10P57789 538 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 SRP54P61011 504 aaKnown RBP9.37□□□□□ -0.91
UBFD1-203ENST00000564106 KCNJ2P63252 427 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 TAP2Q03519 686 aa9.37□□□□□ -0.91
UBFD1-203ENST00000564106 ART3Q13508 389 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms