RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SLC32A1Q9H598 525 aa12.24□□□□□ -0.45
COMMD4-209ENST00000564068 FARSBQ9NSD9 589 aaKnown RBP12.24□□□□□ -0.45
COMMD4-209ENST00000564068 RDH8Q9NYR8 311 aa12.24□□□□□ -0.45
COMMD4-209ENST00000564068 CMAHPQ9Y471 501 aa12.24□□□□□ -0.45
COMMD4-209ENST00000564068 TRBC2A0A5B9 178 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 DLGAP1O14490 977 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 EFCAB14O75071 495 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 KCNE1P15382 129 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 TAS2R41P59536 307 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CREMQ03060 361 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 GRSF1Q12849 480 aaKnown RBP eCLIP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 HSPB3Q12988 150 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 NDUFAF6Q330K2 333 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 LYPLAL1Q5VWZ2 237 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CXXC5Q7LFL8 322 aaKnown RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 FAM83FQ8NEG4 500 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 UFD1Q92890 307 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 MUL1Q969V5 352 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 KCNH6Q9H252 994 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 PLAC1Q9HBJ0 212 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 NFKBIL1Q9UBC1 381 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 TRAV6A0A075B6T7 132 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 INMT-MINDY4F8WBC2 141 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 HOXA11P31270 313 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CLCN4P51793 760 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 SNRPD1P62314 119 aaKnown RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 MARCH9Q86YJ5 346 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CELF2-AS1Q8N7Q2 184 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 NFKBIDQ8NI38 313 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 EXOSC8Q96B26 276 aaKnown RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 GKN1Q9NS71 199 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 NLKQ9UBE8 527 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 BAIAP2Q9UQB8 552 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 BMP7P18075 431 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 HEPACAMQ14CZ8 416 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 SETMARQ53H47 684 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CRB2Q5IJ48 1285 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 KCTD11Q693B1 232 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 KIAA1161Q6NSJ0 714 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF730Q6ZMV8 503 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-209ENST00000564068 IKBIPQ70UQ0 350 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 B3GNT8Q7Z7M8 397 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 SLC35A5Q9BS91 424 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 CDH7Q9ULB5 785 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 NUMA1Q14980 2115 aa12.23□□□□□ -0.45
COMMD4-209ENST00000564068 RLN1P04808 185 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 RPL3P39023 403 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 POLR2LP62875 67 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 INAVAQ3KP66 663 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ANKRD34AQ69YU3 496 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 NRARPQ7Z6K4 114 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 FAM86B1Q8N7N1 296 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 TBX5Q99593 518 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 INPP5KQ9BT40 448 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 FAM83DQ9H4H8 585 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 EQTNQ9NQ60 294 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 TAS2R7Q9NYW3 318 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CPSF4LA6NMK7 179 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 KLHL18O94889 574 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CRYZL1O95825 349 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 PTX3P26022 381 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CASP3P42574 277 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SLC9A3P48764 834 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CDK6Q00534 326 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 WDR45BQ5MNZ6 344 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF433Q8N7K0 673 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 MAL2Q969L2 176 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 FAM129BQ96TA1 746 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 TREX1Q9NSU2 369 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 HCN4Q9Y3Q4 1203 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 A0A1W2PRG6 482 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SEPT4O43236 478 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 KHDRBS3O75525 346 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 TGFB1P01137 390 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 EBLN1P0CF75 366 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CPN2P22792 545 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 FSHRP23945 695 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SSTR4P31391 388 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 STAT5AP42229 794 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CHRNA6Q15825 494 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 C22orf42Q6IC83 251 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms