RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SYNPO2LQ9H987 977 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 CNOT10Q9H9A5 744 aaKnown RBP18.89■□□□□ 0.61
CMTM3-207ENST00000564060 MKKSQ9NPJ1 570 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-207ENST00000564060 GPR83Q9NYM4 423 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 ZNF451Q9Y4E5 1061 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 MAP4K5Q9Y4K4 846 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 SCN3AQ9NY46 2000 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 FASNP49327 2511 aaKnown RBP18.89■□□□□ 0.61
CMTM3-207ENST00000564060 TRBC2A0A5B9 178 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 FEZF1A0PJY2 475 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 H0YIG0 161 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 J3QKU1 62 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 PCDH17O14917 1159 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 IPO13O94829 963 aaKnown RBP18.88■□□□□ 0.61
CMTM3-207ENST00000564060 ZGLP1P0C6A0 271 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 CRABP2P29373 138 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 SLC26A3P40879 764 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 SKP1P63208 163 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 RBBP7Q16576 425 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 ZXDCQ2QGD7 858 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-207ENST00000564060 DCAF10Q5QP82 559 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 TBC1D1Q86TI0 1168 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-207ENST00000564060 ARHGEF39Q8N4T4 335 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 TEX19Q8NA77 164 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 SLC13A3Q8WWT9 602 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 IFT81Q8WYA0 676 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 NEIL2Q969S2 332 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 YIPF2Q9BWQ6 316 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 CAPS2Q9BXY5 557 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 PELI2Q9HAT8 420 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 MLXIPLQ9NP71 852 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 TRPC4Q9UBN4 977 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 SLC22A14Q9Y267 594 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 PCSK5Q92824 1860 aa18.88■□□□□ 0.61
CMTM3-207ENST00000564060 CFAP46Q8IYW2 2715 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 BSNQ9UPA5 3926 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 OR1F1O43749 312 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 NSA2O95478 260 aaKnown RBP18.87■□□□□ 0.61
CMTM3-207ENST00000564060 S100BP04271 92 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-207ENST00000564060 CD1DP15813 335 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 BCL6P41182 706 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 AIMP2Q13155 320 aaKnown RBP18.87■□□□□ 0.61
CMTM3-207ENST00000564060 TMEM214Q6NUQ4 689 aaKnown RBP18.87■□□□□ 0.61
CMTM3-207ENST00000564060 NIPAL1Q6NVV3 410 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 TMPRSS11BQ86T26 416 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 GPSM1Q86YR5 675 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 KLHDC8AQ8IYD2 350 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 DTWD1Q8N5C7 304 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 RHBDF1Q96CC6 855 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 TM4SF19Q96DZ7 209 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 ZNF462Q96JM2 2506 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 UBXN10Q96LJ8 280 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 AIF1LQ9BQI0 150 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 TGIF2Q9GZN2 237 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 ACSS3Q9H6R3 686 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 NMRAL1Q9HBL8 299 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 ATP13A2Q9NQ11 1180 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 WWOXQ9NZC7 414 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 NINJ2Q9NZG7 142 aa18.87■□□□□ 0.61
CMTM3-207ENST00000564060 DOCK10Q96BY6 2186 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 A0A0A6YYC8 382 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-207ENST00000564060 I3L1I5 382 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-207ENST00000564060 FOXS1O43638 330 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 FAM155BO75949 473 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 WDR47O94967 919 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 ALPPP05187 535 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 GNAZP19086 355 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 CXCR2P25025 360 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 AHRP35869 848 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 KLC1Q07866 573 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 RGS1Q08116 209 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 PWP1Q13610 501 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 EFTUD2Q15029 972 aaKnown RBP eCLIP18.86■□□□□ 0.61
CMTM3-207ENST00000564060 TUBB8Q3ZCM7 444 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 SULT1C3Q6IMI6 304 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 SHISA6Q6ZSJ9 500 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 AMER3Q8N944 861 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 FDCSPQ8NFU4 85 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 KIAA1191Q96A73 305 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 CDC42EP4Q9H3Q1 356 aaKnown RBP18.86■□□□□ 0.61
CMTM3-207ENST00000564060 ANKHQ9HCJ1 492 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 C3orf18Q9UK00 162 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 RNF112Q9ULX5 631 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 HS3ST3B1Q9Y662 390 aa18.86■□□□□ 0.61
CMTM3-207ENST00000564060 CCDC189A1A4V9 331 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 NCF1BA6NI72 391 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-207ENST00000564060 NCF1CA8MVU1 366 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-207ENST00000564060 MAP2K7O14733 419 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 NDUFS4O43181 175 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 LCMT2O60294 686 aaKnown RBP18.85■□□□□ 0.61
CMTM3-207ENST00000564060 SLC35E2BP0CK96 405 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 NCF1P14598 390 aaPredicted RBP18.85■□□□□ 0.61
CMTM3-207ENST00000564060 NR1D1P20393 614 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 CASRP41180 1078 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 SLC6A12P48065 614 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 FOXL2P58012 376 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 REEP5Q00765 189 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 HERC3Q15034 1050 aa18.85■□□□□ 0.61
CMTM3-207ENST00000564060 UAP1Q16222 522 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms