RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 U3KQ87 197 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 MAGEB17A8MXT2 336 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 M0QYT0 321 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 PIP5K1BO14986 540 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 EPOP01588 193 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 BAG6P46379 1132 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 GALK2Q01415 458 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 AP5B1Q2VPB7 878 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 CERCAMQ5T4B2 595 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SLC25A25Q6KCM7 469 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 FAM180AQ6UWF9 173 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 CMASQ8NFW8 434 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 SEMA6DQ8NFY4 1073 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 OR6C4Q8NGE1 309 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 FCRL3Q96P31 734 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 SLC6A16Q9GZN6 736 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 NPRL3Q12980 569 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 PUM1Q14671 1186 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLK3-212ENST00000563418 C4orf19Q8IY42 314 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SAMD12Q8N8I0 201 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SLC7A13Q8TCU3 470 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SELENOMQ8WWX9 145 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 MYO19Q96H55 970 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 PRR11Q96HE9 360 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 MFSD14AQ96MC6 490 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 TRAF4Q9BUZ4 470 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 RPS10P5Q9NQ39 176 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SLC22A11Q9NSA0 550 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 ACOXLQ9NUZ1 547 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 GPSM3Q9Y4H4 160 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 GXYLT2A0PJZ3 443 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 F5H5P2 479 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 RFXAPO00287 272 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 TLR5O60602 858 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 TOXO94900 526 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 AHSA1O95433 338 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 BCKDHAP12694 445 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 TPH1P17752 444 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 MAOAP21397 527 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 S100GP29377 79 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 L1CAMP32004 1257 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 ATP5C1P36542 298 aaKnown RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 CD47Q08722 323 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 ABHD18Q0P651 414 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 SV2CQ496J9 727 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 FAM209BQ5JX69 171 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 FAM199XQ6PEV8 388 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 ILDR2Q71H61 639 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 ENTHD1Q8IYW4 607 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 NELL2Q99435 816 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 PRMT7Q9NVM4 692 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 ASF1BQ9NVP2 202 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 CNOT2Q9NZN8 540 aaKnown RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 UXTQ9UBK9 157 aaPredicted RBP6.09□□□□□ -1.43
CLK3-212ENST00000563418 SIX4Q9UIU6 781 aa6.09□□□□□ -1.43
CLK3-212ENST00000563418 CNTNAP4Q9C0A0 1308 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 KIF13BQ9NQT8 1826 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 BHMG1C9JSJ3 638 aaPredicted RBP6.09□□□□□ -1.44
CLK3-212ENST00000563418 PCDH17O14917 1159 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 ARPC5O15511 151 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 MMP20O60882 483 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 MATN4O95460 622 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 CCR10P46092 362 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 GZMKP49863 264 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 SCNN1DP51172 638 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 CDH12P55289 794 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 SRSF11Q05519 484 aaKnown RBP6.09□□□□□ -1.44
CLK3-212ENST00000563418 SPPL2BQ8TCT7 592 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 ACSL6Q9UKU0 697 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 CLEC4AQ9UMR7 237 aa6.09□□□□□ -1.44
CLK3-212ENST00000563418 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 CHRNB2P17787 502 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 PITPNBP48739 271 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 XKP51811 444 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 DLX5P56178 289 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 MRPS5P82675 430 aaKnown RBP6.08□□□□□ -1.44
CLK3-212ENST00000563418 GBE1Q04446 702 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 SNTB2Q13425 540 aaKnown RBP6.08□□□□□ -1.44
CLK3-212ENST00000563418 ATG9BQ674R7 924 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 TAPT1Q6NXT6 567 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 MARCH9Q86YJ5 346 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 CELF2-AS1Q8N7Q2 184 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 HCAR2Q8TDS4 363 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 GIMAP5Q96F15 307 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 NECAB3Q96P71 396 aaPredicted RBP6.08□□□□□ -1.44
CLK3-212ENST00000563418 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
CLK3-212ENST00000563418 MED18Q9BUE0 208 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 TEX10Q9NXF1 929 aaPredicted RBP6.08□□□□□ -1.44
CLK3-212ENST00000563418 CRLS1Q9UJA2 301 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 MEGF6O75095 1541 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 ZNF487B1APH4 448 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 TPOP07202 933 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 POU4F2Q12837 409 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 CPTPQ5TA50 214 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 ZNF561Q8N587 486 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 KIF12Q96FN5 646 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 ZNF778Q96MU6 729 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 ABCG4Q9H172 646 aa6.08□□□□□ -1.44
CLK3-212ENST00000563418 MCCC2Q9HCC0 563 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms