RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 VARSP26640 1264 aaKnown RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 HSD17B3P37058 310 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 OR1D4P47884 311 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 HSPA7P48741 367 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ARSFP54793 590 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 RPS15AP62244 130 aaKnown RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 DCDP81605 110 aaKnown RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 REEP5Q00765 189 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 CDC20Q12834 499 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 NAA30Q147X3 362 aaPredicted RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 SLC9A5Q14940 896 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ACAP2Q15057 778 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 NCF4Q15080 339 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 TBR1Q16650 682 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 FAM83EQ2M2I3 478 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ERCC6LQ2NKX8 1250 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 FAM214AQ32MH5 1076 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 TAF1BQ53T94 588 aaPredicted RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 TECRLQ5HYJ1 363 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 SLCO4C1Q6ZQN7 724 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 SH2D5Q6ZV89 423 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 CYP4X1Q8N118 509 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 TCAIMQ8N3R3 496 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ANKRD53Q8N9V6 530 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 TTC29Q8NA56 475 aaPredicted RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 MFSD9Q8NBP5 474 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ADAMTS17Q8TE56 1095 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 UBTD2Q8WUN7 234 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 EXT2Q93063 718 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 MOCOSQ96EN8 888 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 EFHD1Q9BUP0 239 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 CD244Q9BZW8 370 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 AICDAQ9GZX7 198 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 PELI2Q9HAT8 420 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 IRAK4Q9NWZ3 460 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 NUDT4Q9NZJ9 180 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 CD274Q9NZQ7 290 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 KCND3Q9UK17 655 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 IKBKGQ9Y6K9 419 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 SEC16AO15027 2179 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TRBC2A0A5B9 178 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 CCDC189A1A4V9 331 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 PABPN1LA6NDY0 278 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 LRRC14BA6NHZ5 514 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 VSTM2BA6NLU5 285 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SUPT3HB4E1H0 165 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SUPT3HO75486 399 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 STK16O75716 305 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 IPO13O94829 963 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 TBX6O95947 436 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 UMODP07911 640 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 COL6A2P12110 1019 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 CD22P20273 847 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 AGXTP21549 392 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SCTRP47872 440 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 RPS15P62841 145 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 RHDQ02161 417 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 PCDH1Q08174 1060 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 HYAL2Q12891 473 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 CDC16Q13042 620 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 E2F2Q14209 437 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 ERV3-1Q14264 604 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 UGT8Q16880 541 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SOWAHCQ53LP3 525 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 MLIPQ5VWP3 458 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 ATG9BQ674R7 924 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 C16orf46Q6P387 395 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TAOK1Q7L7X3 1001 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 OVCH1Q7RTY7 1134 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 PRSS41Q7RTY9 318 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TMPRSS11BQ86T26 416 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SYVN1Q86TM6 617 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 METTL27Q8N6F8 245 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 AMER3Q8N944 861 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 KCT2Q8NC54 265 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 CREB3L4Q8TEY5 395 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 UBLCP1Q8WVY7 318 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 EXTL1Q92935 676 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 RERGQ96A58 199 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 WDR34Q96EX3 536 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 PARD6BQ9BYG5 372 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SLC7A5P2Q9GIP4 190 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 SLC26A1Q9H2B4 701 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TXLNGQ9NUQ3 528 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 DNAJC11Q9NVH1 559 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 GEMIN8Q9NWZ8 242 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 WWOXQ9NZC7 414 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 GPRC5BQ9NZH0 403 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 PSMC3IPQ9P2W1 217 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 COPG2Q9UBF2 871 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 CTSFQ9UBX1 484 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 NDOR1Q9UHB4 597 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 RAB21Q9UL25 225 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 TCFL5Q9UL49 500 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms