RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	BDKRB1	P46663	353 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	AGTR2	P50052	363 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	EIF3E	P60228	445 aa	Known RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	ADAM8	P78325	824 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	MAT1A	Q00266	395 aa	Known RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	PRDX1	Q06830	199 aa	Known RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	PTK6	Q13882	451 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	CMPK2	Q5EBM0	449 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	TMEM211	Q6ICI0	200 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	C11orf63	Q6NUN7	778 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	TTC23L	Q6PF05	361 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	AFTPH	Q6ULP2	937 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	TMEM200A	Q86VY9	491 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	CPSF7	Q8N684	471 aa	Known RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	SLC5A8	Q8N695	610 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	FAM98A	Q8NCA5	519 aa	Known RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	C16orf52	Q8NHV5	167 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	ELP5	Q8TE02	316 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	METTL21A	Q8WXB1	218 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	PEX13	Q92968	403 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	CHP1	Q99653	195 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	TSSK1B	Q9BXA7	367 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	P2RY12	Q9H244	342 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	GOLPH3	Q9H4A6	298 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	KCNK13	Q9HB14	408 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	KCNJ16	Q9NPI9	418 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	LRFN1	Q9P244	771 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	C19orf25	Q9UFG5	118 aa	Predicted RBP	7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	SLC2A6	Q9UGQ3	507 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	GNPTG	Q9UJJ9	305 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	L3MBTL1	Q9Y468	752 aa		7.82	□□□□□ -1.16
CKLF-208	ENST00000563092	ABCA4	P78363	2273 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	GTF3C1	Q12789	2109 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	KCNE1B	A0A087WTH5	132 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092		A0A1B0GTH9	108 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	MYO1C	O00159	1063 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PRMT5	O14744	637 aa	Predicted RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PROM1	O43490	865 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PKM	P14618	531 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	TFEB	P19484	476 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	ATP5D	P30049	168 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	CTNNA1	P35221	906 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	DLX5	P56178	289 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PPP2R2A	P63151	447 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	RHAG	Q02094	409 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	LTB	Q06643	244 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	USP10	Q14694	798 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	ARHGAP19	Q14CB8	494 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	CCDC38	Q502W7	563 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	TSTD2	Q5T7W7	516 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	DARS2	Q6PI48	645 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	CEP128	Q6ZU80	1094 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	BIVM	Q86UB2	503 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	CD163	Q86VB7	1156 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	CCDC50	Q8IVM0	306 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	KRT222	Q8N1A0	295 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	RPRML	Q8N4K4	120 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	RAB42	Q8N4Z0	105 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	ZFP62	Q8NB50	900 aa	Predicted RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PLPP5	Q8NEB5	264 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	OR9A4	Q8NGU2	314 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	OR4L1	Q8NH43	312 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	SMPDL3A	Q92484	453 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	RND1	Q92730	232 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	LRRC45	Q96CN5	670 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	ARSG	Q96EG1	525 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	ZNF778	Q96MU6	729 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	TTC1	Q99614	292 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	YIPF2	Q9BWQ6	316 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	TP63	Q9H3D4	680 aa	Predicted RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	LIME1	Q9H400	295 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	MRPS30	Q9NP92	439 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	LANCL2	Q9NS86	450 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PIH1D1	Q9NWS0	290 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	TTC7A	Q9ULT0	858 aa	Predicted RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	RUVBL2	Q9Y230	463 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	PCDHA3	Q9Y5H8	950 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	SCN2A	Q99250	2005 aa		7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	FN1	P02751	2386 aa	Known RBP	7.81	□□□□□ -1.16
CKLF-208	ENST00000563092	OR2W5	A6NFC9	320 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	FAM90A27P	A6NNH2	459 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	MAGEB17	A8MXT2	336 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	KPNA5	O15131	536 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	PSMD3	O43242	534 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	PSIP1	O75475	530 aa	Known RBP	7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	MBD3	O95983	291 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	VSIG8	P0DPA2	414 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	RPS3	P23396	243 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	TPP2	P29144	1249 aa	Predicted RBP	7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	BCL6	P41182	706 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	XCR1	P46094	333 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	ST13	P50502	369 aa	Known RBP	7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	WDR4	P57081	412 aa	Known RBP	7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	MLF1	P58340	268 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	SLC26A5	P58743	744 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	MPP1	Q00013	466 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	TMED2	Q15363	201 aa		7.8	□□□□□ -1.16
CKLF-208	ENST00000563092	CEBPE	Q15744	281 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms