RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SNX15Q9NRS6 342 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 IFT80Q9P2H3 777 aaPredicted RBP15.79■□□□□ 0.12
CDT1-202ENST00000562747 NDOR1Q9UHB4 597 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 GPN3Q9UHW5 284 aaPredicted RBP15.79■□□□□ 0.12
CDT1-202ENST00000562747 ZNF180Q9UJW8 692 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 TCFL5Q9UL49 500 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 ACOT9Q9Y305 439 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 FER1L5A0AVI2 2057 aa15.79■□□□□ 0.12
CDT1-202ENST00000562747 CCDC189A1A4V9 331 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 C2P06681 752 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 CNTFP26441 200 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 MSH2P43246 934 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 CCR8P51685 355 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 OR4D1Q15615 310 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 GARNL3Q5VVW2 1013 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 MLIPQ5VWP3 458 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 PRMT9Q6P2P2 845 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 THOC6Q86W42 341 aaKnown RBP15.78■□□□□ 0.12
CDT1-202ENST00000562747 ATCAYQ86WG3 371 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 TEX19Q8NA77 164 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 OR4K1Q8NGD4 311 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 STAG3L4Q8TBR4 150 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 SLC5A11Q8WWX8 675 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 FKBP10Q96AY3 582 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 SARGQ9BW04 601 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 TXLNGYQ9BZA5 131 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 SYNPO2LQ9H987 977 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 RNF112Q9ULX5 631 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 RUVBL1Q9Y265 456 aaKnown RBP15.78■□□□□ 0.12
CDT1-202ENST00000562747 SLC22A14Q9Y267 594 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 DYRK1BQ9Y463 629 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 KCNE2Q9Y6J6 123 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 MDC1Q14676 2089 aaKnown RBP15.78■□□□□ 0.12
CDT1-202ENST00000562747 SPTBN1Q01082 2364 aaKnown RBP15.78■□□□□ 0.12
CDT1-202ENST00000562747 ICE1Q9Y2F5 2266 aa15.78■□□□□ 0.12
CDT1-202ENST00000562747 SEC16AO15027 2179 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 POC1B-GALNT4F8VUJ3 575 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 RIPK2O43353 540 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 KRT38O76015 456 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 IPO13O94829 963 aaKnown RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 ALBP02768 609 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 ALDOAP04075 364 aaKnown RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 FAM153BP0C7A2 387 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 TFEBP19484 476 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 ITGAXP20702 1163 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 TNFRSF8P28908 595 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 TYK2P29597 1187 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 GGT5P36269 586 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 SLC6A12P48065 614 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 DLG1Q12959 904 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 FAM83EQ2M2I3 478 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 HKDC1Q2TB90 917 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 FAM153CQ494X1 144 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 C4orf17Q53FE4 359 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 CPZQ66K79 652 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 SULT1C3Q6IMI6 304 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 MRPL14Q6P1L8 145 aaKnown RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 ISCA2Q86U28 154 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 PLD3Q8IV08 490 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 PDPRQ8NCN5 879 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 THAP4Q8WY91 577 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.77■□□□□ 0.12
CDT1-202ENST00000562747 NEIL2Q969S2 332 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 ISL2Q96A47 359 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 MVB12AQ96EY5 273 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 CABS1Q96KC9 395 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 C10orf90Q96M02 699 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 CNOT10Q9H9A5 744 aaKnown RBP15.77■□□□□ 0.12
CDT1-202ENST00000562747 PELI2Q9HAT8 420 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 SLC22A11Q9NSA0 550 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 IGSF5Q9NSI5 407 aa15.77■□□□□ 0.12
CDT1-202ENST00000562747 A0A096LPK6 155 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 EXOC1LA0A1B0GW35 172 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 ESPNB1AK53 854 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 KERAO60938 352 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 KLF7O75840 302 aaPredicted RBP15.76■□□□□ 0.11
CDT1-202ENST00000562747 WDR47O94967 919 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 MED26O95402 600 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 S100BP04271 92 aaPredicted RBP15.76■□□□□ 0.11
CDT1-202ENST00000562747 RNF224P0DH78 156 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 GNLYP22749 145 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 GMPRP36959 345 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 MAGEA12P43365 314 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 IL10RAQ13651 578 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 NDUFA9Q16795 377 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 OVCH1Q7RTY7 1134 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 VN1R4Q7Z5H5 301 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 CENPLQ8N0S6 344 aaPredicted RBP15.76■□□□□ 0.11
CDT1-202ENST00000562747 ARHGEF39Q8N4T4 335 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 TBC1D19Q8N5T2 526 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 RHEBL1Q8TAI7 183 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 UHMK1Q8TAS1 419 aaKnown RBP15.76■□□□□ 0.11
CDT1-202ENST00000562747 ADAMTS17Q8TE56 1095 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 DCAKDQ8WVC6 231 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 KCTD4Q8WVF5 259 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 NXNL1Q96CM4 212 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 ATOH8Q96SQ7 321 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms