RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZZZ3Q8IYH5 903 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 CHPFQ8IZ52 775 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 NCSTNQ92542 709 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ELSPBP1Q96BH3 223 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 COQ8BQ96D53 544 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 IL17FQ96PD4 163 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 SPNS1Q9H2V7 528 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 PLAGL1Q9UM63 463 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 ERVK-11Q9UQG0 969 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
SMG1-205ENST00000561947 CDH23Q9H251 3354 aa9.45□□□□□ -0.9
SMG1-205ENST00000561947 DOCK9Q9BZ29 2069 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 GNG14A0A1W2PPG7 69 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 H0YAE9 185 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 AHCYL1O43865 530 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 CCNDBP1O95273 360 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ADH1BP00325 375 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ALPLP05186 524 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 C5AR1P21730 350 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ADARB1P78563 741 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZNF763Q0D2J5 394 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 AGERQ15109 404 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 THEMIS2Q5TEJ8 643 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ANXA8L1Q5VT79 327 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 CPZQ66K79 652 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 CES5AQ6NT32 575 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZCCHC8Q6NZY4 707 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 ERICH5Q6P6B1 374 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 USP51Q70EK9 711 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ARMCX6Q7L4S7 300 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 STK32CQ86UX6 486 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 EID3Q8N140 333 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 UBE2E3Q969T4 207 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PYURFQ96I23 114 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PHF12Q96QT6 1004 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 AASDHPPTQ9NRN7 309 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 TSC22D4Q9Y3Q8 395 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PCDHB11Q9Y5F2 797 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 G3V2T6 193 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 KCNK5O95279 499 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ALBP02768 609 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 TEAD1P28347 426 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 GSTT1P30711 240 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 TUBA4AP68366 448 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PHEXP78562 749 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 MEF2AQ02078 507 aaPredicted RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 HYAL1Q12794 435 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 VMACQ2NL98 169 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 C2orf27AQ580R0 203 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 TTC33Q6PID6 262 aaPredicted RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 PARM1Q6UWI2 310 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 RBM44Q6ZP01 1051 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 COMMD6Q7Z4G1 85 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PATL1Q86TB9 770 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZDHHC13Q8IUH4 622 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ADHFE1Q8IWW8 467 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 CLEC4FQ8N1N0 589 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZNF786Q8N393 782 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZCCHC7Q8N3Z6 543 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 HDDC3Q8N4P3 179 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ZNF513Q8N8E2 541 aaPredicted RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 VPS37AQ8NEZ2 397 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 SNX19Q92543 992 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 TFGQ92734 400 aaPredicted RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 FGF14Q92915 247 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 SDCCAG3Q96C92 435 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 DGCR14Q96DF8 476 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 TEX101Q9BY14 249 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 SERGEFQ9UGK8 458 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 ATP6V1HQ9UI12 483 aa9.44□□□□□ -0.9
SMG1-205ENST00000561947 SAMD4AQ9UPU9 718 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 EXO1Q9UQ84 846 aaKnown RBP9.44□□□□□ -0.9
SMG1-205ENST00000561947 C5orf42Q9H799 3197 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 A0A1W2PP55 124 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 RFXAPO00287 272 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 GNGT2O14610 69 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 CLIC3O95833 236 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TGFB1P01137 390 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 RPN2P04844 631 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 THRBP10828 461 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ERGP11308 486 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 PIK3CBP42338 1070 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 LRRC74AQ0VAA2 488 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 IRF4Q15306 451 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 METRNLQ641Q3 311 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ABRAXAS1Q6UWZ7 409 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 PTOV1Q86YD1 416 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 OFCC1Q8IZS5 231 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TRIML2Q8N7C3 387 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 OR5K2Q8NHB8 316 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 WDR48Q8TAF3 677 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms