RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PRR11Q96HE9 360 aaPredicted RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 AHCYL2Q96HN2 611 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 MARK4Q96L34 752 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 QRFPRQ96P65 431 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 SLC25A23Q9BV35 468 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 SARGQ9BW04 601 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 BRINP2Q9C0B6 783 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 TWSG1Q9GZX9 223 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 EPB41L1Q9H4G0 881 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GAREM1Q9H706 876 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CAAP1Q9H8G2 361 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 EFCAB1Q9HAE3 211 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CAPN10Q9HC96 672 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 DMRT3Q9NQL9 472 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CUEDC1Q9NWM3 386 aaPredicted RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 ZIM2Q9NZV7 527 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CCDC167Q9P0B6 97 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GIMAP2Q9UG22 337 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 PCDHGA5Q9Y5G8 931 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 A0A0J9YY10 115 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 FEZF1A0PJY2 475 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 OR5K3A6NET4 321 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 GYG2O15488 501 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TGFB1P01137 390 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 PROS1P07225 676 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 GLB1P16278 677 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TYRP1P17643 537 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 PTPN4P29074 926 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 EPHA8P29322 1005 aaPredicted RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 PEBP1P30086 187 aaKnown RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 GRIA3P42263 894 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 CCT8P50990 548 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 DIO3P55073 304 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 KCNK10P57789 538 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 BNC1Q01954 994 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TGM3Q08188 693 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 ART3Q13508 389 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 KIAA0040Q15053 153 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TMEM35AQ53FP2 167 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TRIM61Q5EBN2 209 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 DEPDC1Q5TB30 811 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 ZNF425Q6IV72 752 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 NOXRED1Q6NXP6 359 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 CYP20A1Q6UW02 462 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 SFTPA2Q8IWL1 248 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 PCYOX1LQ8NBM8 494 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 MFSD9Q8NBP5 474 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 GLB1L3Q8NCI6 653 aaPredicted RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 ZNF740Q8NDX6 193 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 SRFBP1Q8NEF9 429 aaKnown RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 CHTF18Q8WVB6 975 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 RGMAQ96B86 450 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 KLHL29Q96CT2 875 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 BTBD10Q9BSF8 475 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 RTKNQ9BST9 563 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 C1orf50Q9BV19 199 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 MRPL1Q9BYD6 325 aaKnown RBP9.88□□□□□ -0.83
USP3-219ENST00000561326 DPY30Q9C005 99 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 SLC6A20Q9NP91 592 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 EVA1BQ9NVM1 165 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 NDE1Q9NXR1 346 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 LRIT1Q9P2V4 623 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 AP1M2Q9Y6Q5 423 aa9.88□□□□□ -0.83
USP3-219ENST00000561326 IGKV1-8A0A0C4DH67 115 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 FAM234BA2RU67 622 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 CFAP73A6NFT4 308 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 BBIP1A8MTZ0 92 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 PRR33A8MZF0 331 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 KHNYNO15037 678 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 LCMT2O60294 686 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 PRMT3O60678 531 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SEMA3DO95025 777 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SERPIND1P05546 499 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 KRT16P08779 473 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 G6PDP11413 515 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 BCKDHAP12694 445 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 PNLIPP16233 465 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 CDH3P22223 829 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 ALDH4A1P30038 563 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 ASMTP46597 345 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 RAP1GDS1P52306 607 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 POLR2JP52435 117 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 ARFIP1P53367 373 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 CLNS1AP54105 237 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 ATXN3P54252 364 aaPredicted RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 CLDN8P56748 225 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 YBX1P67809 324 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 SHBQ15464 509 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 KHDRBS2Q5VWX1 349 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 FAM219BQ5XKK7 198 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 PAQR7Q86WK9 346 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SNX32Q86XE0 403 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 ZNF761Q86XN6 746 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms