RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MBLAC1A4D2B0 266 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 BTBD17A6NE02 478 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ANKDD1BA6NHY2 528 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 C4orf47A7E2U8 309 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 A8MU76 341 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TCP11X1B4DZS4 312 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HSBP1L1C9JCN9 74 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRSS46E5RG02 174 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 E5RGE8 158 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRR23D1E9PI22 279 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 F8VVB4 439 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 F8VWA3 439 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 F8W810 466 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NPIPA3F8WFD2 350 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 H0YIZ8 118 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 K7ERQ8 282 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PTGESO14684 152 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CHUKO15111 745 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SLC22A2O15244 555 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MPPED1O15442 326 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 KCNN4O15554 427 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RNF13O43567 381 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BUD23O43709 281 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ITM2AO43736 263 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 UGDHO60701 494 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SDC3O75056 442 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 N4BP1O75113 896 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 CDH16O75309 829 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ZNF217O75362 1048 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BCAS1O75363 584 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 CLN5O75503 358 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 OR4F21O95013 312 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ZFPL1O95159 310 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BMP10O95393 424 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PIGNO95427 931 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 VNN2O95498 520 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 LGI1O95970 557 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NDUFB10O96000 172 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CSTAP01040 98 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 IGHV2-70P01814 119 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PLA2G1BP04054 148 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 CSN3P07498 182 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FHP07954 510 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 GSTA1P08263 222 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FURINP09958 794 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRR23D2P0DMB1 279 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 UNGP13051 313 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 EPCAMP16422 314 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRKACAP17612 351 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HRH2P25021 359 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ELAVL4P26378 380 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ANXA13P27216 316 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FCGR2BP31994 310 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRDX2P32119 198 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 STX2P32856 288 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ADRA1AP35348 466 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HSD17B2P37059 387 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 AVPR1AP37288 418 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MNDAP41218 407 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FOLR3P41439 243 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PTGFRP43088 359 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ALDH3B1P43353 468 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ACADSBP45954 432 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SLC1A6P48664 564 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FNTAP49354 379 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RGS4P49798 205 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 GMPSP49915 693 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PDX1P52945 283 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HADHBP55084 474 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 C21orf59P57076 290 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TAS2R38P59533 333 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 EIF3EP60228 445 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 HNRNPKP61978 463 aaKnown RBP eCLIP1.94□□□□□ -2.1
RTF1-207ENST00000561076 RPS18P62269 152 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 RPP38P78345 283 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ADORA2A-AS1P86434 159 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HOXA4Q00056 320 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 OTUD4Q01804 1114 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ACY1Q03154 408 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 EEF1A2Q05639 463 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 KLC1Q07866 573 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MERTKQ12866 999 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FOXL1Q12952 345 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 GPS2Q13227 327 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 DHX34Q14147 1143 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 MESDQ14696 234 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TMEM132DQ14C87 1099 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 R3HDM1Q15032 1099 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 NPTX1Q15818 432 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CTF1Q16619 201 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 STX1AQ16623 288 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PHKG1Q16816 387 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SMTNL2Q2TAL5 461 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 EIF2S3LQ2VIR3 472 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 Q3ZCU0 254 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 AMZ1Q400G9 498 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BCL7AQ4VC05 210 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TIGD2Q4W5G0 525 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 GPAT3Q53EU6 434 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ZNF385BQ569K4 471 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms