RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ARHGEF9O43307 516 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 KDELR3O43731 214 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 SNX2O60749 519 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 JTBO76095 146 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 TMCC1O94876 653 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 NXPH3O95157 252 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RASAL1O95294 804 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 NHLRC4P0CG21 123 aaPredicted RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 F3P13726 295 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 BRAFP15056 766 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PVRP15151 417 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 CERS1P27544 350 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 TEAD1P28347 426 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PTGER1P34995 402 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RBMXP38159 391 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 CAPZBP47756 277 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PMP22Q01453 160 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RAD51Q06609 339 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 MTA1Q13330 715 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 OLIG2Q13516 323 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 SNTB1Q13884 538 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 KLF9Q13886 244 aaPredicted RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 ACOX1Q15067 660 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PCBP2Q15366 365 aaKnown RBP eCLIP3.58□□□□□ -1.84
HERC1-211ENST00000560983 SYCP1Q15431 976 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 CYTH1Q15438 398 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 KNOP1Q1ED39 458 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 KRTCAP3Q53RY4 240 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PLAC9Q5JTB6 97 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 Q5PR19 223 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RBM20Q5T481 1227 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 OTUD1Q5VV17 481 aaPredicted RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 MLIPQ5VWP3 458 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 HEPHL1Q6MZM0 1159 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 IRGCQ6NXR0 463 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 BRAT1Q6PJG6 821 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 DOK6Q6PKX4 331 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 KIRREL2Q6UWL6 708 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ARSKQ6UWY0 536 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PRSS57Q6UWY2 283 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RFLNAQ6ZTI6 216 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 MARK2Q7KZI7 788 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 HSD11B1LQ7Z5J1 315 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 TMEM110Q86TL2 294 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 DTX2Q86UW9 622 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 DEFB106AQ8N104 65 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 OR2Y1Q8NGV0 311 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 OR8K5Q8NH50 307 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 CPT1BQ92523 772 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PTERQ96BW5 349 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 FAM136AQ96C01 138 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ECHDC3Q96DC8 303 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 GDAP1L1Q96MZ0 367 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ZNF641Q96N77 438 aaPredicted RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 SECISBP2Q96T21 854 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 MAP3K3Q99759 626 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 LLPHQ9BRT6 129 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 HERPUD2Q9BSE4 406 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ACTRT3Q9BYD9 372 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 PANK2Q9BZ23 570 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 LHPPQ9H008 270 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 THAP9Q9H5L6 903 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 STN1Q9H668 368 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 EPS8L2Q9H6S3 715 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 FAM204AQ9H8W3 233 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 SLC40A1Q9NP59 571 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 FBXL4Q9UKA2 621 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 TRHDEQ9UKU6 1024 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ZDHHC8Q9ULC8 765 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 RNF6Q9Y252 685 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 KCNK6Q9Y257 313 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 NYNRINQ9P2P1 1898 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 FER1L5A0AVI2 2057 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 SONP18583 2426 aaKnown RBP3.58□□□□□ -1.84
HERC1-211ENST00000560983 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 HRNRQ86YZ3 2850 aaPredicted RBP3.57□□□□□ -1.84
HERC1-211ENST00000560983 C17orf113A0A1B0GUU1 675 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 A6NNC1 897 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 M0QYV0 167 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 SRGAP2O75044 1071 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 IGSF6O95976 241 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 F10P00742 488 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CBSLP0DN79 551 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 ZNF30P17039 623 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 ITGALP20701 1170 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 TNFAIP3P21580 790 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 MMP11P24347 488 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 EPHB2P29323 1055 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CHRNB4P30926 498 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CBSP35520 551 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 PIK3CGP48736 1102 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CLCNKAP51800 687 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 ZNF135P52742 658 aaPredicted RBP3.57□□□□□ -1.84
HERC1-211ENST00000560983 DCAF7P61962 342 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 ARG2P78540 354 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 HSF1Q00613 529 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CACNG1Q06432 222 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 NME3Q13232 169 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 CUL2Q13617 745 aa3.57□□□□□ -1.84
HERC1-211ENST00000560983 BOP1Q14137 746 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms