RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZSCAN1Q8NBB4 408 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 SNRNP27Q8WVK2 155 aaKnown RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 PYCR2Q96C36 320 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MAGEB18Q96M61 343 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 AIF1LQ9BQI0 150 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 DNAJC11Q9NVH1 559 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 KLHL20Q9Y2M5 609 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 A0A0J9YVX5 310 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 A0A1B0GX78 115 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 STX16-NPEPL1H3BU86 382 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 STX16O14662 325 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 CLGNO14967 610 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 KATNA1O75449 491 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 RAB40ALP0C0E4 278 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 GFAPP14136 432 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 ZNF28P17035 718 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 AHRP35869 848 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 GCGRP47871 477 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 CCT5P48643 541 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 HNRNPH2P55795 449 aaKnown RBP13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 NAA20P61599 178 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 LAPTM5Q13571 262 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PCBP2Q15366 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PDK4Q16654 411 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 NDUFA9Q16795 377 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PRTGQ2VWP7 1150 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PRMT9Q6P2P2 845 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 RGS9BPQ6ZS82 235 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 TIPARPQ7Z3E1 657 aaKnown RBP13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 CAMKVQ8NCB2 501 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 NEIL2Q969S2 332 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 WDR34Q96EX3 536 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 APOPT1Q96IL0 206 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 TMEM79Q9BSE2 394 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 UNKQ9C0B0 810 aaKnown RBP13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PCMTD2Q9NV79 361 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 CUEDC1Q9NWM3 386 aaPredicted RBP13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 COPG2Q9UBF2 871 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 GRID1Q9ULK0 1009 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 CHD8Q9HCK8 2581 aa13.37□□□□□ -0.27
PKNOX1-209ENST00000560448 H0YGG7 62 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 K7EPI3 171 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 HAT1O14929 419 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 DSCR3O14972 297 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 TM9SF1O15321 606 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 UGDHO60701 494 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 SMIM24O75264 130 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 GLRA3O75311 464 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 H2AFYO75367 372 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 ONECUT2O95948 504 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 NTRK1P04629 796 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC35G6P0C7Q6 338 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 DHRS4L1P0CG22 281 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PYGBP11216 843 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CDH1P12830 882 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 EPB42P16452 691 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 TAC1P20366 129 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 ETV4P43268 484 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 GLRBP48167 497 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 ARF3P61204 181 aaPredicted RBP13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 SKP1P63208 163 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 NFKB2Q00653 900 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PWP1Q13610 501 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 FAM53BQ14153 422 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 E2F2Q14209 437 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 TBCCQ15814 346 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PAGE2BQ5JRK9 111 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 WASHC2DQ5SRD0 308 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 ATG9BQ674R7 924 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 NXPE4Q6UWF7 544 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PIGWQ7Z7B1 504 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 KRT78Q8N1N4 520 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PLD6Q8N2A8 252 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CSNK1A1LQ8N752 337 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 TRPV3Q8NET8 790 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 TCP10LQ8TDR4 215 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 DYDC1Q8WWB3 177 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CCDC126Q96EE4 140 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC45A3Q96JT2 553 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 EFCAB11Q9BUY7 163 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 NT5DC2Q9H857 520 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CUTCQ9NTM9 273 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 XPR1Q9UBH6 696 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 CDC14AQ9UNH5 594 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 PADI2Q9Y2J8 665 aa13.36□□□□□ -0.27
PKNOX1-209ENST00000560448 FRYQ5TBA9 3013 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms