RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 KCNC1P48547 511 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CCR8P51685 355 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CHAF1BQ13112 559 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 PWP1Q13610 501 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CATSPEREQ5SY80 951 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 ATG14Q6ZNE5 492 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 ADCK2Q7Z695 626 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 ISCA2Q86U28 154 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 LAPTM4BQ86VI4 370 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 HPS6Q86YV9 775 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CTAGE3PQ8IX95 158 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 AFAP1L2Q8N4X5 818 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 CAMKVQ8NCB2 501 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 FDCSPQ8NFU4 85 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC5A11Q8WWX8 675 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 COL26A1Q96A83 441 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC25A23Q9BV35 468 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 DRC3Q9H069 523 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 ACSS3Q9H6R3 686 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 PELI2Q9HAT8 420 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 MKKSQ9NPJ1 570 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-213ENST00000560175 ABCF3Q9NUQ8 709 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 NINJ2Q9NZG7 142 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC22A14Q9Y267 594 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 MRPS2Q9Y399 296 aaKnown RBP12.55□□□□□ -0.4
SMAD3-213ENST00000560175 SLC22A7Q9Y694 548 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 MAU2Q9Y6X3 613 aa12.55□□□□□ -0.4
SMAD3-213ENST00000560175 FEZF1A0PJY2 475 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CCDC189A1A4V9 331 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 J3QKU1 62 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PEX12O00623 359 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PCDH17O14917 1159 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 FBLP22087 321 aaKnown RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CRABP2P29373 138 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 GRK3P35626 688 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 AHRP35869 848 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CASRP41180 1078 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 SCTRP47872 440 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 OCA2Q04671 838 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 KLC1Q07866 573 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PCDH1Q08174 1060 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 KLRB1Q12918 225 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 DLG1Q12959 904 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 E2F2Q14209 437 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CSHL1Q14406 222 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 OR4D1Q15615 310 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 NXPE4Q6UWF7 544 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 IGFL3Q6UXB1 125 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 ASPGQ86U10 573 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PTRH1Q86Y79 214 aaKnown RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 TCAIMQ8N3R3 496 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 METTL27Q8N6F8 245 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CEP112Q8N8E3 955 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PDPRQ8NCN5 879 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF740Q8NDX6 193 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 SLC13A3Q8WWT9 602 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 MIEF2Q96C03 454 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CYTH2Q99418 400 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 SPNS1Q9H2V7 528 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 C5AR2Q9P296 337 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 PTBP2Q9UKA9 531 aaKnown RBP12.54□□□□□ -0.4
SMAD3-213ENST00000560175 KCNE2Q9Y6J6 123 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 TENM4Q6N022 2769 aa12.54□□□□□ -0.4
SMAD3-213ENST00000560175 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 A0A0A6YYC8 382 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 I3L1I5 382 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SLC28A2O43868 658 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 BMP10O95393 424 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 CYC1P08574 325 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SMIM10L1P0DMW3 83 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 NR1D1P20393 614 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 PHBP35232 272 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 REEP5Q00765 189 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■■□ 23
SMAD3-213ENST00000560175 UBAP2Q5T6F2 1119 aaKnown RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SULT1C3Q6IMI6 304 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 TMEM205Q6UW68 189 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SLCO4C1Q6ZQN7 724 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SPATA6LQ8N4H0 392 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 KCT2Q8NC54 265 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 OR11G2Q8NGC1 345 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 NT5CQ8TCD5 201 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ISL2Q96A47 359 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 WDR34Q96EX3 536 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 MMABQ96EY8 250 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SMIM10Q96HG1 83 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ATOH8Q96SQ7 321 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 FMO2Q99518 471 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms