RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PRAMEP78395 509 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 ARHGAP19Q14CB8 494 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 MINDY4Q4G0A6 757 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 ANKRD20A4Q4UJ75 823 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 LGI4Q8N135 537 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 CPSF7Q8N684 471 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 OR51Q1Q8NH59 317 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 SLC35B2Q8TB61 432 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 UCK2Q9BZX2 261 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 TRIM45Q9H8W5 580 aaPredicted RBP18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 CATSPERZQ9NTU4 200 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 KCNN3Q9UGI6 736 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 TAC3Q9UHF0 121 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 PCYOX1Q9UHG3 505 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 GNPTGQ9UJJ9 305 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 ANAPC5Q9UJX4 755 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 TCAF1Q9Y4C2 921 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 NKX2-6A6NCS4 301 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 ARHGEF33A8MVX0 844 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 CD3EAPO15446 510 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 HOXD4P09016 255 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 OC90Q02509 493 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 MAPKAPK3Q16644 382 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 NDUFA9Q16795 377 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 CTSL3PQ5NE16 218 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 CEP128Q6ZU80 1094 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 LRRC6Q86X45 466 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 SLC5A8Q8N695 610 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 ASB5Q8WWX0 329 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 BIRC8Q96P09 236 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 UTP6Q9NYH9 597 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 RNF6Q9Y252 685 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
RABGGTA-214ENST00000560163 HRNRQ86YZ3 2850 aaPredicted RBP18.58■□□□□ 0.57
RABGGTA-214ENST00000560163 HAT1O14929 419 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 PSIP1O75475 530 aaKnown RBP18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 SLC25A12O75746 678 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 GAS8O95995 478 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 TPM1P09493 284 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 KLK2P20151 261 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 ATP5DP30049 168 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 CHRNB4P30926 498 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 PTGS2P35354 604 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 XCR1P46094 333 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 KLF1Q13351 362 aaPredicted RBP18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 MFSD4BQ5TF39 518 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 PAPD4Q6PIY7 484 aaKnown RBP18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 PLD3Q8IV08 490 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 PLPP5Q8NEB5 264 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 ELP5Q8TE02 316 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 ZNF559Q9BR84 538 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 CDCP1Q9H5V8 836 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 ETNK1Q9HBU6 452 aa18.58■□□□□ 0.56
RABGGTA-214ENST00000560163 A0A1B0GTH9 108 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 BCL6P41182 706 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 CETN2P41208 172 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 PNLIPRP1P54315 467 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 RHAGQ02094 409 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 SFT2D3Q587I9 215 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 CES4AQ5XG92 561 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 VN1R4Q7Z5H5 301 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 CD163Q86VB7 1156 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 TMEM200AQ86VY9 491 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 LRRC56Q8IYG6 542 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 PKP4Q99569 1192 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 DLL4Q9NR61 685 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 CHRAC1Q9NRG0 131 aa18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 FLNAP21333 2647 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-214ENST00000560163 KCNE1BA0A087WTH5 132 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 E7ENX8 843 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 CBFA2T2O43439 604 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 CCNDBP1O95273 360 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 SLC16A8O95907 504 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 STATHP02808 62 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 HSD17B2P37059 387 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 ABATP80404 500 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TAP2Q03519 686 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TBX2Q13207 712 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 USP10Q14694 798 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TMEM211Q6ICI0 200 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TMEM214Q6NUQ4 689 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 PPP1R21Q6ZMI0 780 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 RPS19BP1Q86WX3 136 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 CNGA4Q8IV77 575 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 MPP5Q8N3R9 675 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 PPFIBP2Q8ND30 876 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 CHDHQ8NE62 594 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 ZNF480Q8WV37 535 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 NINJ1Q92982 152 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 LPAR4Q99677 370 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 GSX1Q9H4S2 264 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 KCNJ16Q9NPI9 418 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 PLSCR2Q9NRY7 297 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 LANCL2Q9NS86 450 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TREX1Q9NSU2 369 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 CCM2LQ9NUG4 571 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 HCN3Q9P1Z3 774 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 GALPQ9UBC7 116 aa18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 TSR3Q9UJK0 312 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-214ENST00000560163 SCN3AQ9NY46 2000 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms