RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 FRMPD2BQ6IN97 320 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 IRGCQ6NXR0 463 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 KLHL35Q6PF15 583 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 SCIMPQ6UWF3 145 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 RNF44Q7L0R7 432 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 TRIM46Q7Z4K8 759 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 PRSS42Q7Z5A4 293 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 VN1R4Q7Z5H5 301 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 B3GNT8Q7Z7M8 397 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 PLXDC1Q8IUK5 500 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 KIAA2013Q8IYS2 634 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 OR4N4Q8N0Y3 316 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 DEFB124Q8NES8 71 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 OR4D9Q8NGE8 314 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 OR2T11Q8NH01 316 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 RFWD2Q8NHY2 731 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 METTL6Q8TCB7 284 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 AGR3Q8TD06 166 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 ZNF473Q8WTR7 871 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 SREK1Q8WXA9 508 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 ATP6V1E2Q96A05 226 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 MTFMTQ96DP5 389 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 C11orf24Q96F05 449 aaPredicted RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 ZDHHC12Q96GR4 267 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 MAELQ96JY0 434 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 ZNF285Q96NJ3 590 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 CD180Q99467 661 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 CDC6Q99741 560 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 EFCAB11Q9BUY7 163 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 ACTR8Q9H981 624 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 EML4Q9HC35 981 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 PSD3Q9NYI0 1048 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 ANKMY1Q9P2S6 941 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 SNX7Q9UNH6 387 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 BTRCQ9Y297 605 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 FAM186AA6NE01 2351 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 TRBC2A0A5B9 178 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 MAGEB17A8MXT2 336 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 C4orf51C9J302 202 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 SDHDO14521 159 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 GIPC1O14908 333 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 TOX3O15405 576 aaPredicted RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 DUX1O43812 170 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 CCNDBP1O95273 360 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 ANKRD34CP0C6C1 535 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 PRR35P0CG20 571 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 NELFEP18615 380 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 CSRP1P21291 193 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 CDH3P22223 829 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 GCGRP47871 477 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 INHBCP55103 352 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 CLDN6P56747 220 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 BIRC2Q13490 618 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 TUBB3Q13509 450 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 LAPTM5Q13571 262 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 KIAA0040Q15053 153 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 CLPPQ16740 277 aaPredicted RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 INAVAQ3KP66 663 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 SLC9B1Q4ZJI4 515 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 XKR7Q5GH72 579 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 VWA5B1Q5TIE3 1220 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 CACHD1Q5VU97 1274 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 ARMC6Q6NXE6 501 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 MED27Q6P2C8 311 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 EPGNQ6UW88 154 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 TMIGD1Q6UXZ0 262 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 UBE3DQ7Z6J8 389 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 PIGWQ7Z7B1 504 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 CARFQ8N187 725 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 D2HGDHQ8N465 521 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 MFSD9Q8NBP5 474 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 HUS1BQ8NHY5 278 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 THOC1Q96FV9 657 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 AHCYL2Q96HN2 611 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 MACROD1Q9BQ69 325 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 EBF4Q9BQW3 602 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 SLC29A3Q9BZD2 475 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 PITHD1Q9GZP4 211 aaPredicted RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 EPN3Q9H201 632 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 ZNF768Q9H5H4 540 aaKnown RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 MEAF6Q9HAF1 191 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 MARCOQ9UEW3 520 aaPredicted RBP8.97□□□□□ -0.97
HERC1-206ENST00000559996 PPT2Q9UMR5 302 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 STK38LQ9Y2H1 464 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 PCDHGA11Q9Y5H2 935 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 PCDHGA1Q9Y5H4 931 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 USH1CQ9Y6N9 552 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 AP1M2Q9Y6Q5 423 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 ADAMTS20P59510 1910 aa8.97□□□□□ -0.97
HERC1-206ENST00000559996 SPTBP11277 2137 aa8.96□□□□□ -0.97
HERC1-206ENST00000559996 A0A0J9YVX5 310 aa8.96□□□□□ -0.98
HERC1-206ENST00000559996 A0A1W2PNU3 283 aaPredicted RBP8.96□□□□□ -0.98
HERC1-206ENST00000559996 A8MU76 341 aa8.96□□□□□ -0.98
HERC1-206ENST00000559996 D6RAR5 112 aa8.96□□□□□ -0.98
HERC1-206ENST00000559996 FOXE1O00358 373 aaPredicted RBP8.96□□□□□ -0.98
HERC1-206ENST00000559996 SLC30A4O14863 429 aa8.96□□□□□ -0.98
HERC1-206ENST00000559996 PIP5K1BO14986 540 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms