RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TMEM178AQ8NBL3 297 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 FAM98AQ8NCA5 519 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CAMKVQ8NCB2 501 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 PPFIBP2Q8ND30 876 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 M1APQ8TC57 530 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 MAGED4Q96JG8 741 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 UTP23Q9BRU9 249 aaKnown RBP8.67□□□□□ -1.02
HDDC3-204ENST00000559834 ANKHQ9HCJ1 492 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 GPAMQ9HCL2 828 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 SYBUQ9NX95 663 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 GALPQ9UBC7 116 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 COMMD10Q9Y6G5 202 aa8.67□□□□□ -1.02
HDDC3-204ENST00000559834 CENPEQ02224 2701 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 IGHV3-20A0A0C4DH32 117 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SDR42E2A6NKP2 422 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 P2RX6O15547 441 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SNRPB2P08579 225 aaKnown RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 EEF1DP29692 281 aaKnown RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SSTR2P30874 369 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 GRK3P35626 688 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 CD96P40200 585 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 BCL6P41182 706 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SKIV2L2P42285 1042 aaKnown RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 XCR1P46094 333 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 KCNJ1P48048 391 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 RIPPLY3P57055 190 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 TAS2R50P59544 299 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 DHX34Q14147 1143 aaKnown RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 KCNJ11Q14654 390 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 TUBA3EQ6PEY2 450 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 CYHR1Q6ZMK1 362 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 UBE2R2Q712K3 238 aaPredicted RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SPPL2CQ8IUH8 684 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 PLD3Q8IV08 490 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 PALM2Q8IXS6 379 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 LMNTD2Q8IXW0 634 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 EID3Q8N140 333 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 BEST3Q8N1M1 668 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SLC5A8Q8N695 610 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 PRELID2Q8N945 189 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 CALML6Q8TD86 181 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 KCNJ9Q92806 393 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 LURAP1Q96LR2 239 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 GPR137Q96N19 417 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 LPAR4Q99677 370 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 SYNPO2LQ9H987 977 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 MMP25Q9NPA2 562 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 CCDC177Q9NQR7 707 aaPredicted RBP8.66□□□□□ -1.02
HDDC3-204ENST00000559834 DHRS7Q9Y394 339 aa8.66□□□□□ -1.02
HDDC3-204ENST00000559834 HEATR5BQ9P2D3 2071 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 FAM237BA0A1B0GVD1 139 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 NPIPA5E9PKD4 350 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 EIF3FO00303 357 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 CLDN14O95500 239 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 FGGP02679 453 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 MLNP12872 115 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 CAPN3P20807 821 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 CCND1P24385 295 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SKP1P63208 163 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 OC90Q02509 493 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SIX1Q15475 284 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 OR1C1Q15619 314 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 NSDHLQ15738 373 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 C3AR1Q16581 482 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SFT2D3Q587I9 215 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 FCRLBQ6BAA4 426 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF470Q6ECI4 717 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SPINK14Q6IE38 97 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 LRRC8EQ6NSJ5 796 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 UGT3A1Q6NUS8 523 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 Q6ZPB1 254 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 LANCL3Q6ZV70 420 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 ANKRD37Q7Z713 158 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 C17orf64Q86WR6 236 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 LRRC56Q8IYG6 542 aaPredicted RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 LGI4Q8N135 537 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 MDS2Q8NDY4 140 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 PLPP5Q8NEB5 264 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 ADAMTS18Q8TE60 1221 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 MTFMTQ96DP5 389 aaKnown RBP8.65□□□□□ -1.02
HDDC3-204ENST00000559834 CCDC138Q96M89 665 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 OR1F2PQ96R84 312 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 KLHL1Q9NR64 748 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 NPIPA1Q9UND3 350 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF835Q9Y2P0 537 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 SLC22A7Q9Y694 548 aa8.65□□□□□ -1.02
HDDC3-204ENST00000559834 PKDREJQ9NTG1 2253 aa8.65□□□□□ -1.03
HDDC3-204ENST00000559834 TCRBV7S3A2A0A539 114 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ASPDHA6ND91 283 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms