RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 NEIL2Q969S2 332 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 TM4SF19Q96DZ7 209 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 THAP11Q96EK4 314 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 MMABQ96EY8 250 aaPredicted RBP14.06□□□□□ -0.16
RPL28-208ENST00000559463 TSNARE1Q96NA8 513 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 SMAD5Q99717 465 aaKnown RBP14.06□□□□□ -0.16
RPL28-208ENST00000559463 CRB3Q9BUF7 120 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 DERL2Q9GZP9 239 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 SEMA3GQ9NS98 782 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 CTNNAL1Q9UBT7 734 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 CDC14AQ9UNH5 594 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 OARD1Q9Y530 152 aa14.06□□□□□ -0.16
RPL28-208ENST00000559463 FLNBO75369 2602 aaKnown RBP14.05□□□□□ -0.16
RPL28-208ENST00000559463 STX2P32856 288 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 GMPRP36959 345 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 CCR8P51685 355 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 SLC12A2P55011 1212 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 OCA2Q04671 838 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 FAM53BQ14153 422 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 USP10Q14694 798 aaKnown RBP14.05□□□□□ -0.16
RPL28-208ENST00000559463 C18orf21Q32NC0 220 aaPredicted RBP14.05□□□□□ -0.16
RPL28-208ENST00000559463 CATSPEREQ5SY80 951 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 UBAP2Q5T6F2 1119 aaKnown RBP14.05□□□□□ -0.16
RPL28-208ENST00000559463 TMEM214Q6NUQ4 689 aaKnown RBP14.05□□□□□ -0.16
RPL28-208ENST00000559463 SHISA5Q8N114 240 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 GALNT16Q8N428 558 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 SPATA6LQ8N4H0 392 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 MMGT1Q8N4V1 131 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 PPM1NQ8N819 430 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 TEX19Q8NA77 164 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 MFSD9Q8NBP5 474 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 CLEC1AQ8NC01 280 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 OR9A4Q8NGU2 314 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 SLC5A11Q8WWX8 675 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 MIEF2Q96C03 454 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 TSPAN17Q96FV3 270 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 SARGQ9BW04 601 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 SPNS1Q9H2V7 528 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 TRPC4Q9UBN4 977 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 ZNF451Q9Y4E5 1061 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 MAP4K5Q9Y4K4 846 aa14.05□□□□□ -0.16
RPL28-208ENST00000559463 PTPN13Q12923 2485 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 CTAGE15A4D2H0 777 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 PRPF4O43172 522 aaKnown RBP eCLIP14.04□□□□□ -0.16
RPL28-208ENST00000559463 WISP1O95388 367 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 ZIC2O95409 532 aaPredicted RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 IGHEP01854 428 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 ANXA5P08758 320 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 CCDC166P0CW27 439 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 CD1DP15813 335 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 STMN1P16949 149 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 GRK3P35626 688 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 EFNA3P52797 238 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 SOX8P57073 446 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 MAT1AQ00266 395 aaKnown RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 MYBPC3Q14896 1274 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 OR4D1Q15615 310 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 RBBP7Q16576 425 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 NDUFA9Q16795 377 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 NADK2Q4G0N4 442 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 VWA5B1Q5TIE3 1220 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 ASPGQ86U10 573 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 CTAGE6Q86UF2 777 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 THOC6Q86W42 341 aaKnown RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 ZC3H7AQ8IWR0 971 aaKnown RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 KCT2Q8NC54 265 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 ZNF740Q8NDX6 193 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 OR11G2Q8NGC1 345 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 RHBDF1Q96CC6 855 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 MKKSQ9NPJ1 570 aaPredicted RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 DMGDHQ9UI17 866 aaKnown RBP14.04□□□□□ -0.16
RPL28-208ENST00000559463 C3orf18Q9UK00 162 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 SLC22A14Q9Y267 594 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 PCDHGB7Q9Y5F8 929 aa14.04□□□□□ -0.16
RPL28-208ENST00000559463 DOPEY2Q9Y3R5 2298 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 LRRK2Q5S007 2527 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 TRBC2A0A5B9 178 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 OR1F1O43749 312 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 NSA2O95478 260 aaKnown RBP14.03□□□□□ -0.16
RPL28-208ENST00000559463 SLC35E2BP0CK96 405 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 IL1RNP18510 177 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 SPRP35270 261 aaPredicted RBP14.03□□□□□ -0.16
RPL28-208ENST00000559463 SLC6A12P48065 614 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 CD97P48960 835 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 HNMTP50135 292 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 CSRP3P50461 194 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 RAB10P61026 200 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 REEP5Q00765 189 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 AIMP2Q13155 320 aaKnown RBP14.03□□□□□ -0.16
RPL28-208ENST00000559463 NAB1Q13506 487 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 TGFBIQ15582 683 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 TUBB8Q3ZCM7 444 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 GRTP1Q5TC63 336 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 FRA10AC1Q70Z53 315 aa14.03□□□□□ -0.16
RPL28-208ENST00000559463 CMC1Q7Z7K0 106 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms