RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FOXS1O43638 330 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 CCNT2O60583 730 aaKnown RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 SRPX2O60687 465 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 WFS1O76024 890 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 ONECUT2O95948 504 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 MT-ND3P03897 115 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 TUBBP07437 444 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 RBP1P09455 135 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 C1GALT1C1LP0DN25 315 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 H2AFXP16104 143 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 HRH2P25021 359 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 CCR8P51685 355 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 ABHD18Q0P651 414 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 DOC2AQ14183 400 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 NAA25Q14CX7 972 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 PDK4Q16654 411 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 LGSNQ5TDP6 509 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 C1orf189Q5VU69 101 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 ATG9BQ674R7 924 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 TLDC1Q6P9B6 456 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 GOLGA7Q7Z5G4 137 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 PDSS2Q86YH6 399 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNX1-204ENST00000559061 RIBC1Q8N443 379 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 METTL27Q8N6F8 245 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 CSNK1A1LQ8N752 337 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 BANPQ8N9N5 519 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 KCT2Q8NC54 265 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 PHF21BQ96EK2 531 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 SCYL1Q96KG9 808 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 TMEM237Q96Q45 408 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 C1QTNF3Q9BXJ4 246 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 DPH1Q9BZG8 443 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 ROPN1BQ9BZX4 212 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 ROPN1Q9HAT0 212 aaPredicted RBP10.9□□□□□ -0.66
SNX1-204ENST00000559061 CPNE5Q9HCH3 593 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 CUTCQ9NTM9 273 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 GPRC5BQ9NZH0 403 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 SERTAD3Q9UJW9 196 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 ZNF225Q9UK10 706 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 SCN3AQ9NY46 2000 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 HYKKA2RU49 373 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 SYCE1LA8MT33 242 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 STX16-NPEPL1H3BU86 382 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 STX16O14662 325 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 DSCR3O14972 297 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 PLIN3O60664 434 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 DNAJB6O75190 326 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 B3GALT4O96024 378 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 EIF2S1P05198 315 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 GSTA1P08263 222 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 FURINP09958 794 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 GFAPP14136 432 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 KRT15P19012 456 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 KRT4P19013 534 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 CRHR1P34998 444 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 CASP2P42575 452 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 RPS15AP62244 130 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 RPS18P62269 152 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 TRAF3Q13114 568 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 IL10RAQ13651 578 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 SLBPQ14493 270 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX1-204ENST00000559061 UNC50Q53HI1 259 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 ATP1A1-AS1Q5TC04 95 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 TMEM214Q6NUQ4 689 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 MRPL14Q6P1L8 145 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 KLC3Q6P597 504 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 CYB5D1Q6P9G0 228 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 LCA5Q86VQ0 697 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 AFAP1L2Q8N4X5 818 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 ESX1Q8N693 406 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 TEX9Q8N6V9 391 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 AMER3Q8N944 861 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 MYRIPQ8NFW9 859 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 OR52B6Q8NGF0 335 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
SNX1-204ENST00000559061 EHD1Q9H4M9 534 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 KLHL31Q9H511 634 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 SLC17A7Q9P2U7 560 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 DYRK1BQ9Y463 629 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 KCNE2Q9Y6J6 123 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 AP1M2Q9Y6Q5 423 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 BSNQ9UPA5 3926 aa10.89□□□□□ -0.67
SNX1-204ENST00000559061 A0A1B0GX78 115 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 PABPN1LA6NDY0 278 aaKnown RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 AGPSO00116 658 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 FFAR3O14843 346 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GPR42O15529 346 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 OR1F1O43749 312 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 TYROBPO43914 113 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GLRA3O75311 464 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 KLF7O75840 302 aaPredicted RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 S100BP04271 92 aaPredicted RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 SMIM10L1P0DMW3 83 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 GNAZP19086 355 aa10.88□□□□□ -0.67
SNX1-204ENST00000559061 HNRNPH1P31943 449 aaKnown RBP10.88□□□□□ -0.67
SNX1-204ENST00000559061 DLSTP36957 453 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms