RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PTK6Q13882 451 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 NAA25Q14CX7 972 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 GARNL3Q5VVW2 1013 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 FCRLBQ6BAA4 426 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 TMEM214Q6NUQ4 689 aaKnown RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 AGTRAPQ6RW13 159 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 TMEM207Q6UWW9 146 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 MAMDC2Q7Z304 686 aaPredicted RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 KBTBD2Q8IY47 623 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 ZNF740Q8NDX6 193 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 OR1N1Q8NGS0 311 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 FAR1Q8WVX9 515 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 ALKBH8Q96BT7 664 aaKnown RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 PYCR2Q96C36 320 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 TM4SF19Q96DZ7 209 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 NPAS2Q99743 824 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 EBNA1BP2Q99848 306 aaKnown RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 TRIM51Q9BSJ1 452 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 FAM167BQ9BTA0 163 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 SGPP1Q9BX95 441 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 ZNF700Q9H0M5 742 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 EPS8L2Q9H6S3 715 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 MKKSQ9NPJ1 570 aaPredicted RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 CCDC177Q9NQR7 707 aaPredicted RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 C14orf105Q9NVL8 296 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 TRMT1Q9NXH9 659 aaKnown RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 OSGIN2Q9Y236 505 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 SLC5A6Q9Y289 635 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 LRBAP50851 2863 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 C4orf51C9J302 202 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 ZBTB14O43829 449 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 RDH16O75452 317 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 SEC24DO94855 1032 aaPredicted RBP12.81□□□□□ -0.36
VPS18-203ENST00000558855 DDAH2O95865 285 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 WDPCPO95876 746 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 SERPINA7P05543 415 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 HSD17B2P37059 387 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 TNFSF10P50591 281 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 KCNK10P57789 538 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 PMP22Q01453 160 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 RELAQ04206 551 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 NAE1Q13564 534 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 FAM53BQ14153 422 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 SLC26A11Q86WA9 606 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 CNTN4Q8IWV2 1026 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 LMNTD2Q8IXW0 634 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 OR5T3Q8NGG3 340 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 RERGQ96A58 199 aaPredicted RBP12.81□□□□□ -0.36
VPS18-203ENST00000558855 LMF1Q96S06 567 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 AICDAQ9GZX7 198 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 ASIC3Q9UHC3 531 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 TRMT6Q9UJA5 497 aaKnown RBP12.81□□□□□ -0.36
VPS18-203ENST00000558855 CDC14AQ9UNH5 594 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 CHMP2BQ9UQN3 213 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 PSAT1Q9Y617 370 aa12.81□□□□□ -0.36
VPS18-203ENST00000558855 FBN2P35556 2912 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
VPS18-203ENST00000558855 LRRTM2O43300 516 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 KLHL41O60662 606 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 NSA2O95478 260 aaKnown RBP12.8□□□□□ -0.36
VPS18-203ENST00000558855 ANXA5P08758 320 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 NPPBP16860 134 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 MST1P26927 711 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 ELK3P41970 407 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 ZNF460Q14592 562 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 FASTKD3Q14CZ7 662 aaKnown RBP12.8□□□□□ -0.36
VPS18-203ENST00000558855 TLR1Q15399 786 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 PPP1R7Q15435 360 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 CATSPEREQ5SY80 951 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 IRAK1BP1Q5VVH5 260 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 HIBCHQ6NVY1 386 aaPredicted RBP12.8□□□□□ -0.36
VPS18-203ENST00000558855 CALML6Q8TD86 181 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 TSLPQ969D9 159 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 CERS2Q96G23 380 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 C5orf34Q96MH7 638 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 HES7Q9BYE0 225 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 LANCL2Q9NS86 450 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 COMMD10Q9Y6G5 202 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
VPS18-203ENST00000558855 KCNE1BA0A087WTH5 132 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS18-203ENST00000558855 ZG16O60844 167 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 PIAS1O75925 651 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 C8orf89P0DMQ9 161 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 EDN3P14138 238 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 FDXRP22570 491 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 XCR1P46094 333 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 RPS15AP62244 130 aaKnown RBP12.79□□□□□ -0.36
VPS18-203ENST00000558855 OLR1P78380 273 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 ARG2P78540 354 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 RHAGQ02094 409 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 SPANXN3Q5MJ09 141 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 HECTD2Q5U5R9 776 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 C1QL3Q5VWW1 255 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms