RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PHGDHO43175 533 aaKnown RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 OR1F1O43749 312 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 DNAJB6O75190 326 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 FAM155BO75949 473 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 F10P00742 488 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 HNF4AP41235 474 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 EFNA3P52797 238 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 AIMP2Q13155 320 aaKnown RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 SP140Q13342 867 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 TUBB8Q3ZCM7 444 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 FBXO48Q5FWF7 155 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 DUPD1Q68J44 220 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 MAATS1Q7Z4T9 603 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 CTAGE6Q86UF2 777 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 BBOF1Q8ND07 529 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 MRRFQ96E11 262 aaKnown RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 EGFL8Q99944 293 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 SGPP1Q9BX95 441 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 RBCK1Q9BYM8 510 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 DRC3Q9H069 523 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 SEMA3GQ9NS98 782 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 WHRNQ9P202 907 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 NXT1Q9UKK6 140 aaKnown RBP11.88□□□□□ -0.51
SMAD3-208ENST00000558827 MKL2Q9ULH7 1088 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 LRRK2Q5S007 2527 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 COL12A1Q99715 3063 aa11.88□□□□□ -0.51
SMAD3-208ENST00000558827 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SVILO95425 2214 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 RDH16O75452 317 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 KLHL18O94889 574 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 IGHEP01854 428 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ACPPP15309 386 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ZNF37AP17032 561 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SLC26A3P40879 764 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 GDF5P43026 501 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 AVPR1BP47901 424 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 GLRBP48167 497 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SLC12A2P55011 1212 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 GPX6P59796 221 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 RPS15AP62244 130 aaKnown RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 OLR1P78380 273 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 DSG2Q14126 1118 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 TSNQ15631 228 aaKnown RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 NDUFA9Q16795 377 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 MINDY4Q4G0A6 757 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 LCTLQ6UWM7 567 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SBSNQ6UWP8 590 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 GALNT7Q86SF2 657 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ASPGQ86U10 573 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ATCAYQ86WG3 371 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ZC3H7AQ8IWR0 971 aaKnown RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 CTAGE3PQ8IX95 158 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 OR5T3Q8NGG3 340 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 OR56A3Q8NH54 315 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SLC13A3Q8WWT9 602 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 FBXL8Q96CD0 374 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 VPS39Q96JC1 886 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 CNDP1Q96KN2 507 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 MAGEB10Q96LZ2 347 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-208ENST00000558827 PCBD2Q9H0N5 130 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 ENAMQ9NRM1 1142 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 PLA2G3Q9NZ20 509 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 CTNNAL1Q9UBT7 734 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 MAP4K5Q9Y4K4 846 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 PCDHGB7Q9Y5F8 929 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 NUP210LQ5VU65 1888 aa11.87□□□□□ -0.51
SMAD3-208ENST00000558827 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 TXNDC9O14530 226 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 VPS4BO75351 444 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CDC123O75794 336 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 SORBS2O94875 1100 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ALPPP05187 535 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CXCR2P25025 360 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 GRK3P35626 688 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CCR8P51685 355 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 FRG1Q14331 258 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CSHL1Q14406 222 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 USP10Q14694 798 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 EFTUD2Q15029 972 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■□□□□ 11
SMAD3-208ENST00000558827 RBBP5Q15291 538 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 IRAK1BP1Q5VVH5 260 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 GARNL3Q5VVW2 1013 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ATG9BQ674R7 924 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ZDHHC24Q6UX98 284 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms