RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 OR1I1O60431 355 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 SMPD2O60906 423 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 PROSCO94903 275 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 TPM2P07951 284 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 CELA3AP09093 270 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 BMP5P22003 454 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 ADRA1AP35348 466 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 ARHGAP25P42331 645 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 XCR1P46094 333 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 HLCSP50747 726 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 MLF1P58340 268 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 MPP3Q13368 585 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 ABRAXAS2Q15018 415 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 TYSND1Q2T9J0 566 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 DNAJC21Q5F1R6 531 aaKnown RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 RBM43Q6ZSC3 357 aaKnown RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 SEM1Q6ZVN7 128 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 SLC22A15Q8IZD6 547 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 MAPK1IP1LQ8NDC0 245 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 ELP5Q8TE02 316 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 RNASE6Q93091 150 aaKnown RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 NUP62CLQ9H1M0 184 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
SMAD3-206ENST00000558739 C19orf25Q9UFG5 118 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-206ENST00000558739 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 G3V3Y1 287 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 KDM1AO60341 852 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 AP2A2O94973 939 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 EPXP11678 715 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 CCR7P32248 378 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 TRHRP34981 398 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-206ENST00000558739 EMP3P54852 163 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 SLC26A5P58743 744 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 TAS2R50P59544 299 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 PPIAP62937 165 aaKnown RBP11.08□□□□□ -0.64
SMAD3-206ENST00000558739 HSPA14Q0VDF9 509 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 GPR33Q49SQ1 333 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 FILIP1LQ4L180 1135 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 C10orf62Q5T681 223 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-206ENST00000558739 C1orf185Q5T7R7 199 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 PAQR7Q86WK9 346 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 RFX6Q8HWS3 928 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 PLD3Q8IV08 490 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 OR51Q1Q8NH59 317 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 CCDC138Q96M89 665 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 OR2A5Q96R48 311 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 MACROD1Q9BQ69 325 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 SARGQ9BW04 601 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SMAD3-206ENST00000558739 RSPH14Q9UHP6 348 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 SLC39A10Q9ULF5 831 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 R3HDM2Q9Y2K5 976 aaKnown RBP11.08□□□□□ -0.64
SMAD3-206ENST00000558739 NFS1Q9Y697 457 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 MED12Q93074 2177 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 FREM3P0C091 2139 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 HEATR5AQ86XA9 2040 aa11.08□□□□□ -0.64
SMAD3-206ENST00000558739 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 IQCF5A8MTL0 148 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 FTH1P02794 183 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 GSTM1P09488 218 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 IL1RNP18510 177 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 ASCL1P50553 236 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 RHAGQ02094 409 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 GSTM4Q03013 218 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 KLHL30Q0D2K2 578 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 SPARCL1Q14515 664 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 RANBP10Q6VN20 620 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 PID1Q7Z2X4 250 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 LRRC75A-AS1Q8N1F1 130 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 TFB1MQ8WVM0 346 aaKnown RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 HAUS1Q96CS2 278 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 GBP4Q96PP9 640 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 YIPF4Q9BSR8 244 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 LIMA1Q9UHB6 759 aaKnown RBP11.07□□□□□ -0.64
SMAD3-206ENST00000558739 ADGRE2Q9UHX3 823 aa11.07□□□□□ -0.64
SMAD3-206ENST00000558739 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 SGK494L7N484 410 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 CNOT4O95628 575 aaKnown RBP11.06□□□□□ -0.64
SMAD3-206ENST00000558739 CRTAMO95727 393 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 ENDOUP21128 410 aaKnown RBP11.06□□□□□ -0.64
SMAD3-206ENST00000558739 AGTR2P50052 363 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 NSDHLQ15738 373 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 DENND5AQ6IQ26 1287 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 PODNL1Q6PEZ8 512 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 POMZP3Q6PJE2 187 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 CREB3L4Q8TEY5 395 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-206ENST00000558739 LPAR4Q99677 370 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms