RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CAPN1P07384 714 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 RAB40ALP0C0E4 278 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 PRKAR1AP10644 381 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
SMAD3-205ENST00000558428 PTPN4P29074 926 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 AGTR2P50052 363 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 RPS18P62269 152 aaKnown RBP11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CYP4F2P78329 520 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 REEP5Q00765 189 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MC1RQ01726 317 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 ERV3-1Q14264 604 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 NCF4Q15080 339 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 PDK4Q16654 411 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 PFKFB4Q16877 469 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MLIPQ5VWP3 458 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 LRRC70Q7Z2Q7 622 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 ASPGQ86U10 573 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 TDRPQ86YL5 185 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 DTWD1Q8N5C7 304 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 METTL27Q8N6F8 245 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MFSD9Q8NBP5 474 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CAMKVQ8NCB2 501 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 ZNF740Q8NDX6 193 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 EPS8L3Q8TE67 593 aaKnown RBP11.78□□□□□ -0.52
SMAD3-205ENST00000558428 UBTD2Q8WUN7 234 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 SLC13A3Q8WWT9 602 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CAVIN3Q969G5 261 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MACROD1Q9BQ69 325 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 SARGQ9BW04 601 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CAPS2Q9BXY5 557 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CD244Q9BZW8 370 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 GPRC5BQ9NZH0 403 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CPSF2Q9P2I0 782 aaKnown RBP11.78□□□□□ -0.52
SMAD3-205ENST00000558428 XPR1Q9UBH6 696 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 OPTCQ9UBM4 332 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 ASB1Q9Y576 335 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MAU2Q9Y6X3 613 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 ATMQ13315 3056 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 GOLGA8RI6L899 631 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 SERPIND1P05546 499 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 C1GALT1C1LP0DN25 315 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ITGAXP20702 1163 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 OR1D4P47884 311 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 EMP3P54852 163 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ALDH18A1P54886 795 aaKnown RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 NFKB2Q00653 900 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 CDC20Q12834 499 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 SETDB1Q15047 1291 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 RBBP5Q15291 538 aaKnown RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 GARNL3Q5VVW2 1013 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ATG9BQ674R7 924 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 SLCO4C1Q6ZQN7 724 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 SYVN1Q86TM6 617 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 OR2W6PQ8NHA6 318 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ACMSDQ8TDX5 336 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 MZB1Q8WU39 189 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 COL26A1Q96A83 441 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 MRPL57Q9BQC6 102 aaKnown RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 FAM117AQ9C073 453 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 MRPL46Q9H2W6 279 aaKnown RBP11.77□□□□□ -0.53
SMAD3-205ENST00000558428 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 PADI2Q9Y2J8 665 aa11.77□□□□□ -0.53
SMAD3-205ENST00000558428 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 TLDC2A0PJX2 215 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 K7EPI3 171 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 TK2O00142 265 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 NDUFS4O43181 175 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 KLK8O60259 260 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 SMIM24O75264 130 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 CDH16O75309 829 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 TUBBP07437 444 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 CD63P08962 238 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 NUDT17P0C025 328 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 SLC35G6P0C7Q6 338 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 PYGBP11216 843 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 KRT15P19012 456 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 CXCR2P25025 360 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 SCTRP47872 440 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 RHDQ02161 417 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 SLBPQ14493 270 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMAD3-205ENST00000558428 CRTC2Q53ET0 693 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-205ENST00000558428 XKR6Q5GH73 641 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 PRMT9Q6P2P2 845 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 COX15Q7KZN9 410 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 KRT78Q8N1N4 520 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 ARHGEF39Q8N4T4 335 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 PTGR2Q8N8N7 351 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-205ENST00000558428 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 FKBP10Q96AY3 582 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms