RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 TMEM270Q6UE05 265 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ASB18Q6ZVZ8 466 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TUBA1AQ71U36 451 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 KCTD9Q7L273 389 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ARMC9Q7Z3E5 817 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SYVN1Q86TM6 617 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZNF410Q86VK4 478 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PTOV1Q86YD1 416 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CREBRFQ8IUR6 639 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PLD3Q8IV08 490 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RASGEF1CQ8N431 466 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CNNM3Q8NE01 707 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NEK11Q8NG66 645 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 FBXO30Q8TB52 745 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SEMA4DQ92854 862 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 URB1-AS1Q96HZ7 61 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SORCS2Q96PQ0 1159 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 BTBD9Q96Q07 612 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GFI1Q99684 422 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TUBA1CQ9BQE3 449 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SPRTNQ9H040 489 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 HSD3B7Q9H2F3 369 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PPIL3Q9H2H8 161 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RWDD1Q9H446 243 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GOLPH3LQ9H4A5 285 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NOX4Q9NPH5 578 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 MRGBPQ9NV56 204 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SLC38A7Q9NVC3 462 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NPAP1Q9NZP6 1156 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ING1Q9UK53 422 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CHMP2BQ9UQN3 213 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 EXOC6BQ9Y2D4 811 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 LRRC37A3O60309 1634 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 LAMA2P24043 3122 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 XIRP1Q702N8 1843 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GLI3P10071 1580 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CEP170BQ9Y4F5 1589 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GRIN2DO15399 1336 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 UBE4BO95155 1302 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RNF17Q9BXT8 1623 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NALCNQ8IZF0 1738 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 FAM230AA0A1W2PPH8 454 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 FAM172BPA6NC97 362 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMEM189-UBE2V1I3L0A0 370 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TO15178 435 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ATP6V1G1O75348 118 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 C1QL1O75973 258 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SCGNO76038 276 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GLCEO94923 617 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 KCNK5O95279 499 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 BAG4O95429 457 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PGK2P07205 417 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CYC1P08574 325 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TRIM49P0CI25 452 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TRIM49CP0CI26 452 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RPS2P15880 293 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CKMT2P17540 419 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PPP2R1AP30153 589 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NAPAP54920 295 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ATP5IP56385 69 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 STARD6P59095 220 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 MRPS21P82921 87 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PPP2R2BQ00005 443 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 MAT1AQ00266 395 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SPOCK1Q08629 439 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TRAP1Q12931 704 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 DLG1Q12959 904 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 UBE2V1Q13404 147 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 VEZF1Q14119 521 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GIT2Q14161 759 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMEM132DQ14C87 1099 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TAZQ16635 292 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMEM119Q4V9L6 283 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 FASTKD1Q53R41 847 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RAB6CQ53S08 254 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SYT14P1Q58G82 188 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 AWAT1Q58HT5 328 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 UGT3A1Q6NUS8 523 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CAVIN1Q6NZI2 390 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TTC27Q6P3X3 843 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SHQ1Q6PI26 577 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZER1Q7Z7L7 766 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PIP4P1Q86T03 277 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMEM126BQ8IUX1 230 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NAGSQ8N159 534 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 Q8N1X5 172 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZNF713Q8N859 430 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 VANGL1Q8TAA9 524 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 PHLDA1Q8WV24 401 aaPredicted RBP1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 SECTM1Q8WVN6 248 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RLN3Q8WXF3 142 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 NXNL1Q96CM4 212 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TBC1D31Q96DN5 1066 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 ADGRG7Q96K78 797 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 GDAP1L1Q96MZ0 367 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 CTAGE1Q96RT6 745 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RAD9AQ99638 391 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 RTP3Q9BQQ7 232 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 TRIM51Q9BSJ1 452 aa1.26□□□□□ -2.21
CTDSPL2-202ENST00000558373 QTRT1Q9BXR0 403 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms