RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GPR42O15529 346 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 NSA2O95478 260 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 PGAM1P18669 254 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 IL10P22301 178 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 SOX11P35716 441 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 DCTP40126 519 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 FNTAP49354 379 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 SKP1P63208 163 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 SP140Q13342 867 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 MINDY4Q4G0A6 757 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 ZC3H7AQ8IWR0 971 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 LRRC56Q8IYG6 542 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 ARHGEF39Q8N4T4 335 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 OR9A4Q8NGU2 314 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 EEF1AKMT1Q8WVE0 214 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 IMMP1LQ96LU5 166 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 MESP1Q9BRJ9 268 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 HAUS8Q9BT25 410 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 RUBCNLQ9H714 662 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 IARS2Q9NSE4 1012 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 NEU2Q9Y3R4 380 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 A8MUI8 341 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 E2F3O00716 465 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 RASAL1O95294 804 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 WDPCPO95876 746 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 STSP08842 583 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC35G6P0C7Q6 338 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 COL8A1P27658 744 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 BCL6P41182 706 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 AGTR2P50052 363 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 IL2P60568 153 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 TBPL1P62380 186 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 CCZ1BP86790 482 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 CCZ1P86791 482 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 MPP1Q00013 466 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 ZNF33BQ06732 778 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 PCOLCEQ15113 449 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 KCTD19Q17RG1 926 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 ZNF787Q6DD87 383 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 CAPN13Q6MZZ7 669 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 NIPAL1Q6NVV3 410 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 AGTRAPQ6RW13 159 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 TMEM207Q6UWW9 146 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 KIAA0408Q6ZU52 694 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 NR4A3Q92570 626 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 ALKBH8Q96BT7 664 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 ZNF354BQ96LW1 612 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 ABI3Q9P2A4 366 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 PDE10AQ9Y233 779 aa12.88□□□□□ -0.35
SNRPA1-204ENST00000558020 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ENO4A6NNW6 628 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 P2RX6O15547 441 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ITGAMP11215 1152 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 XCR1P46094 333 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 CCR8P51685 355 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 MAT1AQ00266 395 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 RBPJQ06330 500 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ACTN3Q08043 901 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 NAE1Q13564 534 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 CRYMQ14894 314 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 HERC3Q15034 1050 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ZRSR2Q15696 482 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 EXT1Q16394 746 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 SPANXN3Q5MJ09 141 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 PLAG1Q6DJT9 500 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 TMEM214Q6NUQ4 689 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 HIBCHQ6NVY1 386 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 MTFR2Q6P444 385 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ASPGQ86U10 573 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ATL1Q8WXF7 558 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 TM4SF19Q96DZ7 209 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ARL15Q9NXU5 204 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
SNRPA1-204ENST00000558020 SVILO95425 2214 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 CES2O00748 559 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 SEC24DO94855 1032 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 MLYCDO95822 493 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 NPPBP16860 134 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 CASP6P55212 293 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 AP1S2P56377 157 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms