RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, human

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-215	ENST00000557654	KIDINS220	Q9ULH0	1771 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654		A0A1B0GUL7	405 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654		A0A1W2PPM1	405 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	MEX3A	A1L020	520 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	GOLGA6L4	A6NEF3	574 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	GOLGA6L19	H0YKK7	550 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	NXPH2	O95156	264 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	IVL	P07476	585 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PSMA5	P28066	241 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	MMP12	P39900	470 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	TNNT3	P45378	269 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PAX9	P55771	341 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	HSPB3	Q12988	150 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	IL11RA	Q14626	422 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	SNAI3	Q3KNW1	292 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	C11orf63	Q6NUN7	778 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	DOK6	Q6PKX4	331 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	SYT10	Q6XYQ8	523 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	UNC5CL	Q8IV45	518 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	CCDC83	Q8IWF9	413 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	GPRC5A	Q8NFJ5	357 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	OR13C3	Q8NGS6	347 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	C10orf90	Q96M02	699 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	AGAP3	Q96P47	875 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	DGAT2	Q96PD7	388 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	MYCBP	Q99417	103 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	RBM4B	Q9BQ04	359 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	BPIFA3	Q9BQP9	254 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	MRPL1	Q9BYD6	325 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PDRG1	Q9NUG6	133 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	OLAH	Q9NV23	265 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PANK4	Q9NVE7	773 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	ANO10	Q9NW15	660 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	RSPH14	Q9UHP6	348 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	ABT1	Q9ULW3	272 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PPIE	Q9UNP9	301 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	ADCY9	O60503	1353 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	PLEKHG2	Q9H7P9	1386 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	MLH3	Q9UHC1	1453 aa		4.22	□□□□□ -1.73
GPHN-215	ENST00000557654	POGZ	Q7Z3K3	1410 aa		4.21	□□□□□ -1.73
GPHN-215	ENST00000557654	SETD1A	O15047	1707 aa	Known RBP	4.21	□□□□□ -1.73
GPHN-215	ENST00000557654	VPS37C	A5D8V6	355 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	C2orf81	A6NN90	581 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	FPGT	O14772	594 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	ERAL1	O75616	437 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	TRUB2	O95900	331 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	HMOX1	P09601	288 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	CYP2A7	P20853	494 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	OAS2	P29728	719 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	MAGEA9	P43362	315 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	GTF2A1	P52655	376 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	DSCR10	P59022	87 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	NECTIN1	Q15223	517 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	CAMK4	Q16566	473 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	HLA-B	Q31612	363 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	FASTKD1	Q53R41	847 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	FAAP20	Q6NZ36	180 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	SLC25A47	Q6Q0C1	308 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	FIP1L1	Q6UN15	594 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	RPAIN	Q86UA6	219 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	NUDT13	Q86X67	352 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	SYT2	Q8N9I0	419 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	CCDC191	Q8NCU4	936 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	NEK11	Q8NG66	645 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	TEKT4	Q8WW24	435 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	ZNRF4	Q8WWF5	429 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	PYGO2	Q9BRQ0	406 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	TRIM51	Q9BSJ1	452 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	CCDC106	Q9BWC9	280 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	NAT10	Q9H0A0	1025 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	SPHK2	Q9NRA0	654 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	MAN2C1	Q9NTJ4	1040 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	EXOC6B	Q9Y2D4	811 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	RRP15	Q9Y3B9	282 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	TRIM17	Q9Y577	477 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	JCAD	Q9P266	1359 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	SPATA31D1	Q6ZQQ2	1576 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	DLG5	Q8TDM6	1919 aa		4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	XRN1	Q8IZH2	1706 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-215	ENST00000557654	SBNO1	A3KN83	1393 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654		A0A1B0GVY2	172 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	hCG_1809904	A0A1W2PP81	198 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654		A0A1W2PPE2	198 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654		A0A1W2PR64	198 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654		A0A1W2PR80	420 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	NEMP2	A6NFY4	417 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	HIP1	O00291	1037 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	SEC24A	O95486	1093 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	IGHV2-70	P01814	119 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	CAST	P20810	708 aa	Known RBP	4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	ZNF10	P21506	573 aa	Predicted RBP	4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	CSTF2	P33240	577 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	5e-7	■■■■□ 25.7
GPHN-215	ENST00000557654	LIG4	P49917	911 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	GSC	P56915	257 aa	Predicted RBP	4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	SMC1A	Q14683	1233 aa	Known RBP	4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	TNIP1	Q15025	636 aa		4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	TTC31	Q49AM3	519 aa	Predicted RBP	4.2	□□□□□ -1.74
GPHN-215	ENST00000557654	NAA16	Q6N069	864 aa	Predicted RBP	4.2	□□□□□ -1.74

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