RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 TCTN3Q6NUS6 607 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 NXPE4Q6UWF7 544 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 ABHD13Q7L211 337 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 ISCA2Q86U28 154 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 CLEC1AQ8NC01 280 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 C7orf57Q8NEG2 295 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 C9orf43Q8TAL5 461 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 NEIL2Q969S2 332 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 PYCR2Q96C36 320 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 TM4SF19Q96DZ7 209 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 MMABQ96EY8 250 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 RHOXF2Q9BQY4 288 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 EFCAB11Q9BUY7 163 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 CD244Q9BZW8 370 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 ING2Q9H160 280 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 CAB39LQ9H9S4 337 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 STARD5Q9NSY2 213 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 DNAJC11Q9NVH1 559 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 CUEDC1Q9NWM3 386 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 NUDT4Q9NZJ9 180 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 ADGRE2Q9UHX3 823 aa7.48□□□□□ -1.21
PSEN1-222ENST00000557356 PTBP2Q9UKA9 531 aaKnown RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 RUVBL1Q9Y265 456 aaKnown RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 PCDHGA9Q9Y5G4 932 aaKnown RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 MRPS18BQ9Y676 258 aaKnown RBP7.48□□□□□ -1.21
PSEN1-222ENST00000557356 IGLV3-12A0A075B6K2 115 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 IQANK1A0A1B0GTG1 560 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SYNDIG1LA6NDD5 238 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ANKDD1BA6NHY2 528 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NCF1BA6NI72 391 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 VSTM2BA6NLU5 285 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NCF1CA8MVU1 366 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SUPT3HB4E1H0 165 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 B8ZZF3 427 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 AGPSO00116 658 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 KERAO60938 352 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SUPT3HO75486 399 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 FAM155BO75949 473 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NSA2O95478 260 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ALPPP05187 535 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SERPINA6P08185 405 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ZGLP1P0C6A0 271 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NCF1P14598 390 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 EPB42P16452 691 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 VARSP26640 1264 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 TNFRSF8P28908 595 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 OTX2P32243 289 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 OR1D4P47884 311 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SLC6A12P48065 614 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ALDH18A1P54886 795 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SOX8P57073 446 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 RPS18P62269 152 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 YBX1P67809 324 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 MEF2AQ02078 507 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 PCDH1Q08174 1060 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 TGM3Q08188 693 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 CDC16Q13042 620 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 AIMP2Q13155 320 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 LY6DQ14210 128 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 RCN2Q14257 317 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ZNF460Q14592 562 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 RBBP5Q15291 538 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 TBCCQ15814 346 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 RBBP7Q16576 425 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 PDK4Q16654 411 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ATG9BQ674R7 924 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 LCN10Q6JVE6 187 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 TMIGD1Q6UXZ0 262 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 MBOAT1Q6ZNC8 495 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 LRRC70Q7Z2Q7 622 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ZNF605Q86T29 641 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SPATA6LQ8N4H0 392 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 EXD3Q8N9H8 876 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SNX31Q8N9S9 440 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 PDPRQ8NCN5 879 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SRFBP1Q8NEF9 429 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NT5CQ8TCD5 201 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 STT3BQ8TCJ2 826 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ADAMTS17Q8TE56 1095 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 METTL21AQ8WXB1 218 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 NXNL1Q96CM4 212 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 PTCD3Q96EY7 689 aaKnown RBP7.47□□□□□ -1.21
PSEN1-222ENST00000557356 OR4K3Q96R72 315 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 PAFAH2Q99487 392 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SLC25A23Q9BV35 468 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ALG9Q9H6U8 611 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 SNX15Q9NRS6 342 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 C5AR2Q9P296 337 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 OPTCQ9UBM4 332 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 TRPC4Q9UBN4 977 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ANAPC2Q9UJX6 822 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ZNF451Q9Y4E5 1061 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 ANGPTL3Q9Y5C1 460 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 MAU2Q9Y6X3 613 aa7.47□□□□□ -1.21
PSEN1-222ENST00000557356 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms