RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TAPBPO15533 448 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 OR1F1O43749 312 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SUPT3HO75486 399 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 STK16O75716 305 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 KLF7O75840 302 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SLC35G6P0C7Q6 338 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 COL6A2P12110 1019 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 ITGAXP20702 1163 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 FBLP22087 321 aaKnown RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 BCL6P41182 706 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 MAGEA12P43365 314 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 OR1D4P47884 311 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 AVPR1BP47901 424 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 POLE2P56282 527 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 NFKB2Q00653 900 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 OCA2Q04671 838 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 CDC16Q13042 620 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 IL10RAQ13651 578 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SLC9A5Q14940 896 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 CATSPEREQ5SY80 951 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 COX15Q7KZN9 410 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 TMPRSS11BQ86T26 416 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 CENPLQ8N0S6 344 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 ADAMTS17Q8TE56 1095 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SLC13A3Q8WWT9 602 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 EXT2Q93063 718 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 NACC2Q96BF6 587 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 MTBPQ96DY7 904 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 ATOH8Q96SQ7 321 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 CCDC77Q9BR77 488 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 DRC3Q9H069 523 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 VPS11Q9H270 941 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SYNPO2LQ9H987 977 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 ZNF282Q9UDV7 671 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 FETUBQ9UGM5 382 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
SLIRP-209ENST00000557342 KCNMB2Q9Y691 235 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 MAU2Q9Y6X3 613 aa11.89□□□□□ -0.51
SLIRP-209ENST00000557342 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 P2RX6O15547 441 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 MED26O95402 600 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 IGHEP01854 428 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 AHRP35869 848 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 GMPRP36959 345 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 GDF5P43026 501 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 SCTRP47872 440 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 KCNC1P48547 511 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 HSPA7P48741 367 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 REEP5Q00765 189 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 IRF9Q00978 393 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 RGS1Q08116 209 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 PWP1Q13610 501 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 LY6DQ14210 128 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 SLC29A2Q14542 456 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 NKG7Q16617 165 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ATG9BQ674R7 924 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 LRRC70Q7Z2Q7 622 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 KRT78Q8N1N4 520 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 METTL27Q8N6F8 245 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 SNX31Q8N9S9 440 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 CD244Q9BZW8 370 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 PITHD1Q9GZP4 211 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-209ENST00000557342 EHD1Q9H4M9 534 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 ZFP69BQ9UJL9 534 aa11.88□□□□□ -0.51
SLIRP-209ENST00000557342 IQANK1A0A1B0GTG1 560 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 URADA6NGE7 173 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 VSTM2BA6NLU5 285 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 H0YIG0 161 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 UBXN8O00124 270 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 PEX12O00623 359 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
SLIRP-209ENST00000557342 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
SLIRP-209ENST00000557342 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
SLIRP-209ENST00000557342 RBP1P09455 135 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 MYBL2P10244 700 aa11.87□□□□□ -0.51
SLIRP-209ENST00000557342 GSTM2P28161 218 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms