RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZFYVE21Q9BQ24 234 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 TMEM121Q9BTD3 319 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 P2RY12Q9H244 342 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 TSPY26PQ9H489 355 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 ZNF160Q9HCG1 818 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 CATSPERZQ9NTU4 200 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 RIC8BQ9NVN3 520 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 UTP6Q9NYH9 597 aaKnown RBP8.24□□□□□ -1.09
VRK1-206ENST00000557222 ZC3H7BQ9UGR2 993 aaKnown RBP8.24□□□□□ -1.09
VRK1-206ENST00000557222 GNPTGQ9UJJ9 305 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 TFR2Q9UP52 801 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 TCAF1Q9Y4C2 921 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 PCDHGB6Q9Y5F9 930 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 ZFHX3Q15911 3703 aa8.24□□□□□ -1.09
VRK1-206ENST00000557222 LOC102723996A0A087X1L8 192 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 IGHV1-45A0A0A0MS14 117 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 A0A1W2PPV9 198 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 ARHGAP10A1A4S6 786 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 GRID2IPA4D2P6 1211 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 H3BMM5 538 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 CD3EAPO15446 510 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 ALOX12BO75342 701 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 ERVK-10P10266 1014 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 ERGP11308 486 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 COX6A1P12074 109 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 PRF1P14222 555 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 PKMP14618 531 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 AGAP20933 346 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 FBLP22087 321 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 CMPK1P30085 196 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 SLC26A3P40879 764 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 CSE1LP55060 971 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 ADARP55265 1226 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 RBPJQ06330 500 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 ARHGAP19Q14CB8 494 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 RPS26P11Q5JNZ5 115 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 PCID2Q5JVF3 399 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 ARMC3Q5W041 872 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 PTRHD1Q6GMV3 140 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 FRMPD2BQ6IN97 320 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 FBXO42Q6P3S6 717 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 TMEM207Q6UWW9 146 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 PPP1R21Q6ZMI0 780 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 BNC2Q6ZN30 1099 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 SHISA6Q6ZSJ9 500 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 MICALCLQ6ZW33 695 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 OTOAQ7RTW8 1153 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 PEX26Q7Z412 305 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 FJX1Q86VR8 437 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 C2orf73Q8N5S3 287 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 SUN3Q8TAQ9 357 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 LKAAEAR1Q8TD35 194 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 TAAR6Q96RI8 345 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 MIPEPQ99797 713 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 UNKQ9C0B0 810 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 ZNF700Q9H0M5 742 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 MKKSQ9NPJ1 570 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 PIH1D1Q9NWS0 290 aaKnown RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 SLC2A6Q9UGQ3 507 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 TEKT2Q9UIF3 430 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 TTC7AQ9ULT0 858 aaPredicted RBP8.23□□□□□ -1.09
VRK1-206ENST00000557222 DUSP10Q9Y6W6 482 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 MAU2Q9Y6X3 613 aa8.23□□□□□ -1.09
VRK1-206ENST00000557222 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 LOC105369274A0A096LPK9 316 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 LOC102723532A0A0G2JNH3 316 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 A0A0J9YVX5 310 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 ZNF839A8K0R7 811 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 IQCF5A8MTL0 148 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 IDSB3KWA1 339 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 E7EVH7 732 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 PFDN6O15212 129 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 NDUFS3O75489 264 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 CCNDBP1O95273 360 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 RASAL1O95294 804 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 MATN4O95460 622 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 F13BP05160 661 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 CA7P43166 264 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 NPY2RP49146 381 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 FAM53BQ14153 422 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 GBX1Q14549 363 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 SEMA3AQ14563 771 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 OASLQ15646 514 aaKnown RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 ZNF630Q2M218 657 aaPredicted RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 ANKRD20A4Q4UJ75 823 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 VWA2Q5GFL6 755 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 RNF187Q5TA31 235 aaPredicted RBP8.22□□□□□ -1.09
VRK1-206ENST00000557222 CNSTQ6PJW8 725 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 XKRXQ6PP77 449 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 PAOXQ6QHF9 649 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 TMEM205Q6UW68 189 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 GFRALQ6UXV0 394 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 C4orf22Q6V702 233 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 GDF7Q7Z4P5 450 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 TAX1BP1Q86VP1 789 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 OR4N4Q8N0Y3 316 aa8.22□□□□□ -1.09
VRK1-206ENST00000557222 PPHLN1Q8NEY8 458 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms