RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 DCDC1P59894 354 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 APBA1Q02410 837 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TMEM115Q12893 351 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PRKAA1Q13131 559 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 STIM1Q13586 685 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 GALNT3Q14435 633 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TUBB8Q3ZCM7 444 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 MARC1Q5VT66 337 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 C1orf189Q5VU69 101 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 MBNL2Q5VZF2 373 aaKnown RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TMEM211Q6ICI0 200 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TLDC1Q6P9B6 456 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CDHR3Q6ZTQ4 885 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 LRRC49Q8IUZ0 686 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CLYBLQ8N0X4 340 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TTC30BQ8N4P2 665 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TRAM1L1Q8N609 369 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 TEX26Q8N6G2 289 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ACRBPQ8NEB7 543 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 MYRIPQ8NFW9 859 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 OR4E2Q8NGC2 313 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 JOSD2Q8TAC2 188 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SUN3Q8TAQ9 357 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CCDC110Q8TBZ0 833 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 BRSK1Q8TDC3 778 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 DENND1AQ8TEH3 1009 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 AGAP11Q8TF27 550 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 GLYATL1Q969I3 302 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 FKBP10Q96AY3 582 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ARL8AQ96BM9 186 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 EID2BQ96D98 161 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 RMND5BQ96G75 393 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SMIM14Q96QK8 99 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ZSCAN5AQ9BUG6 496 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 POLDIP3Q9BY77 421 aaKnown RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SPRTNQ9H040 489 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ARFGAP3Q9NP61 516 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 RASSF1Q9NS23 344 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SLC24A2Q9UI40 661 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 DNAJC12Q9UKB3 198 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 NXT1Q9UKK6 140 aaKnown RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PACSIN3Q9UKS6 424 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CDYLQ9Y232 598 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 COLEC10Q9Y6Z7 277 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ARID1AO14497 2285 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CCDC88CQ9P219 2028 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 C1orf232A0A0U1RR37 186 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 TCRBV16S1A1N1A0A5B0 115 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 BICDL2A1A5D9 508 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 GSAPA4D1B5 854 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 KLHL33A6NCF5 533 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 VSTM2BA6NLU5 285 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 RNF212BA8MTL3 300 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 IDSB3KWA1 339 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ANKRD66B4E2M5 251 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 EEF2KO00418 725 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PRPSAP2O60256 369 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 KLK8O60259 260 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ALOX12BO75342 701 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 POP7O75817 140 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 TOX4O94842 621 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 SMC2O95347 1197 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 FGFR1OPO95684 399 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 TSPAN12O95859 305 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ABHD16AO95870 558 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 WDPCPO95876 746 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NUDT3O95989 172 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 SERPINA7P05543 415 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 MTHFD1P11586 935 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ICAM2P13598 275 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ST6GAL1P15907 406 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 GPD1P21695 349 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PCSK6P29122 969 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 MMP13P45452 471 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 CDH6P55285 790 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 FOXL2P58012 376 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 MAXP61244 160 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NOMO3P69849 1222 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PPP2R2BQ00005 443 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PTP4A2Q12974 167 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 MYBPHQ13203 477 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 OLIG2Q13516 323 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PNOCQ13519 176 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 IHHQ14623 411 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 DEFB113Q30KQ7 82 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ZNF569Q5MCW4 686 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 ERMARDQ5T6L9 678 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NAA35Q5VZE5 725 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NAPRTQ6XQN6 538 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 RFX8Q6ZV50 586 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NDUFAF7Q7L592 441 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 PSTKQ8IV42 348 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 NPWQ8N729 165 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 SIMC1Q8NDZ2 872 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 GPR150Q8NGU9 434 aa4.48□□□□□ -1.69
SCFD1-223ENST00000557076 GOT1L1Q8NHS2 421 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-223ENST00000557076 DTX3LQ8TDB6 740 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms