RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MRPL40Q9NQ50 206 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 TMEM45AQ9NWC5 275 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 KCTD5Q9NXV2 234 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 GTSE1Q9NYZ3 720 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NUDT4Q9NZJ9 180 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CD274Q9NZQ7 290 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 GALPQ9UBC7 116 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 RNF7Q9UBF6 113 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SUN2Q9UH99 717 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 BCAP29Q9UHQ4 241 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 BAIAP2L1Q9UHR4 511 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CDH7Q9ULB5 785 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MED16Q9Y2X0 877 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NUMBLQ9Y6R0 609 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 IGLV3-16A0A075B6K0 115 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 A0A0U1RQS6 177 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PIPSLA2A3N6 862 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PABPN1LA6NDY0 278 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 HEPACAM2A8MVW5 462 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 E9PBE3 544 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 UBXN8O00124 270 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PSMD11O00231 422 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PSMD12O00232 456 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 GAPDHSO14556 408 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 UBFD1O14562 309 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 PLD2O14939 933 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 NPC1O15118 1278 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 KLHL41O60662 606 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 TM7SF2O76062 418 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CDK14O94921 469 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ESRRBO95718 433 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 OTCP00480 354 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 C8GP07360 202 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 HIST1H2AGP0C0S8 130 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 UROSP10746 265 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ATP1B2P14415 290 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 VCLP18206 1134 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 MSH3P20585 1137 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 HIST1H2ADP20671 130 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PIK3R1P27986 724 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 EEF1DP29692 281 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 MAPK9P45984 424 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CCR10P46092 362 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PIK3CGP48736 1102 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ACADVLP49748 655 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ATP4BP51164 291 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CCR3P51677 355 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CDH13P55290 713 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 DCDC1P59894 354 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 BTKQ06187 659 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 FCHO2Q0JRZ9 810 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ELP6Q0PNE2 266 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ART3Q13508 389 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RUNX3Q13761 415 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PCBP2Q15366 365 aaKnown RBP eCLIP4.34□□□□□ -1.71
SRP54-212ENST00000556992 TGFBIQ15582 683 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ZNF284Q2VY69 593 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 HNRNPA1L2Q32P51 320 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 ATP13A5Q4VNC0 1218 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 FNDC3BQ53EP0 1204 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 LDLRAP1Q5SW96 308 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PLEKHS1Q5SXH7 462 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RARS2Q5T160 578 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 C9orf64Q5T6V5 341 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 FAM46CQ5VWP2 391 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SULT1C3Q6IMI6 304 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ANKRD54Q6NXT1 300 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 C16orf89Q6UX73 402 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CYHR1Q6ZMK1 362 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 GPRIN3Q6ZVF9 776 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 FRA10AC1Q70Z53 315 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 DPPA4Q7L190 304 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SPATA19Q7Z5L4 167 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 ADGRD2Q7Z7M1 963 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 TSPAN33Q86UF1 283 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CPNE9Q8IYJ1 553 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 TCAIMQ8N3R3 496 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 TRAM1L1Q8N609 369 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CLDN19Q8N6F1 224 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CDYL2Q8N8U2 506 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RBM15BQ8NDT2 890 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 MAPK15Q8TD08 544 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 MCOLN3Q8TDD5 553 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 TRPC4APQ8TEL6 797 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ASZ1Q8WWH4 475 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SORCS1Q8WY21 1168 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 OR8D1Q8WZ84 308 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SUSD6Q92537 303 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ATP6V1E2Q96A05 226 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RAB7BQ96AH8 199 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 FAM136AQ96C01 138 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RSPRY1Q96DX4 576 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 MOCOSQ96EN8 888 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PPP1R16AQ96I34 528 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 GUCD1Q96NT3 240 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SERPINI1Q99574 410 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 H2AFJQ9BTM1 129 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 THTPAQ9BU02 230 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms