RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZNF549Q6P9A3 640 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CDHR3Q6ZTQ4 885 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 OR4E2Q8NGC2 313 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CKAP2Q8WWK9 683 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 TRAPPC9Q96Q05 1148 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
PSEN1-219ENST00000556951 AARSD1Q9BTE6 412 aaKnown RBP12.17□□□□□ -0.46
PSEN1-219ENST00000556951 PITPNM3Q9BZ71 974 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 POPDC3Q9HBV1 291 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 ATP13A2Q9NQ11 1180 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-219ENST00000556951 SERTAD3Q9UJW9 196 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 CRYL1Q9Y2S2 319 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
PSEN1-219ENST00000556951 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
PSEN1-219ENST00000556951 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 ANKRD12Q6UB98 2062 aa12.17□□□□□ -0.46
PSEN1-219ENST00000556951 A0A1B0GUH1 482 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 OR2AG2A6NM03 316 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 AGAP14A8MT82 685 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 BTN3A3O00478 584 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 WIPF1O43516 503 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 KLHL41O60662 606 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 ESR1P03372 595 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CTSBP07858 339 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 DHRS4L1P0CG22 281 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 PKMP14618 531 aaKnown RBP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 PVRP15151 417 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CYP2A7P20853 494 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CD9P21926 228 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CDH3P22223 829 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 FDXRP22570 491 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 RPS3P23396 243 aaKnown RBP eCLIP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 ACRV1P26436 265 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 FMO4P31512 558 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 SLC26A3P40879 764 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 ETV4P43268 484 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 ITGA9Q13797 1035 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 DBN1Q16643 649 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 RBM20Q5T481 1227 aaKnown RBP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 TAX1BP1Q86VP1 789 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CEP97Q8IW35 865 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 NXPE1Q8N323 547 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 BEND7Q8N7W2 519 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 OR2Y1Q8NGV0 311 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 DNAJB14Q8TBM8 379 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 TM9SF4Q92544 642 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 C12orf66Q96MD2 445 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 GBP5Q96PP8 586 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 FAM111AQ96PZ2 611 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 NDNQ99608 321 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 OLFM1Q99784 485 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 SPRTNQ9H040 489 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-219ENST00000556951 KLHL25Q9H0H3 589 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 FAM60AQ9NP50 221 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 SLC17A7Q9P2U7 560 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CRLS1Q9UJA2 301 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 CNTRLQ7Z7A1 2325 aa12.16□□□□□ -0.46
PSEN1-219ENST00000556951 GMNCA6NCL1 334 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 C9J4A7 227 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 E7EQ34 232 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 H3BMM5 538 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 PEX12O00623 359 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 PRMT5O14744 637 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 PHGDHO43175 533 aaKnown RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 SGTAO43765 313 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 IGHEP01854 428 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 APOA4P06727 396 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 SLC35E2BP0CK96 405 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 AGXTP21549 392 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 SKIV2L2P42285 1042 aaKnown RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 CDKN2DP55273 166 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 GTF2H3Q13889 308 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 ITIH4Q14624 930 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 TERF2Q15554 542 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 ZNF630Q2M218 657 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 CCDC153Q494R4 210 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 VWA2Q5GFL6 755 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 ARMC6Q6NXE6 501 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 LILRA3Q8N6C8 439 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 DDHD1Q8NEL9 900 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 GDAP1Q8TB36 358 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 PTERQ96BW5 349 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 RMDN2Q96LZ7 410 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 P2RY12Q9H244 342 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 C12orf65Q9H3J6 166 aaKnown RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 SLC22A11Q9NSA0 550 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 SMOXQ9NWM0 555 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms