RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SRPK3Q9UPE1 567 aa16.69■□□□□ 0.26
SHMT2-225ENST00000556798 ANGPTL3Q9Y5C1 460 aa16.69■□□□□ 0.26
SHMT2-225ENST00000556798 ZZEF1O43149 2961 aa16.69■□□□□ 0.26
SHMT2-225ENST00000556798 LAMA5O15230 3695 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 KCNE1BA0A087WTH5 132 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 A0A087WV48 116 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 STX16-NPEPL1H3BU86 382 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 MEN1O00255 615 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 E2F3O00716 465 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 STX16O14662 325 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 RGS16O15492 202 aaPredicted RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 DLX3O60479 287 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 HBQ1P09105 142 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 LIFP15018 202 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 EPB42P16452 691 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CD22P20273 847 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 TAC1P20366 129 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 ALAS2P22557 587 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CRHR1P34998 444 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 SCTRP47872 440 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CCT5P48643 541 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CYP4F2P78329 520 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 IRF8Q02556 426 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 TLE3Q04726 772 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CHIT1Q13231 466 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 DOC2AQ14183 400 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 SLC9A5Q14940 896 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 RBBP5Q15291 538 aaKnown RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 ZNF385CQ66K41 422 aaPredicted RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 RPS27LQ71UM5 84 aaKnown RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 GOLGA7Q7Z5G4 137 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 ASPGQ86U10 573 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 ANKRD53Q8N9V6 530 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CT55Q8WUE5 264 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 APOPT1Q96IL0 206 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 C10orf90Q96M02 699 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 LRFN5Q96NI6 719 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 NSUN5Q96P11 429 aaKnown RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 GBP5Q96PP8 586 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 RUFY1Q96T51 708 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CHST8Q9H2A9 424 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 CROTQ9UKG9 612 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 TNPO3Q9Y5L0 923 aaKnown RBP16.68■□□□□ 0.26
SHMT2-225ENST00000556798 PTPRQQ9UMZ3 2332 aa16.68■□□□□ 0.26
SHMT2-225ENST00000556798 SPAG7O75391 227 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 PROCP04070 461 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 SERPIND1P05546 499 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 KLK3P07288 261 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 CREB1P16220 341 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ITGAXP20702 1163 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 F8A1P23610 371 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 DLSTP36957 453 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ARSFP54793 590 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 SNRPNP63162 240 aaKnown RBP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ABHD18Q0P651 414 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ADNP2Q6IQ32 1131 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 LRIG3Q6UXM1 1119 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 TBC1D19Q8N5T2 526 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 BANPQ8N9N5 519 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 THAP11Q96EK4 314 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 MOCOSQ96EN8 888 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 SARGQ9BW04 601 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 GPN2Q9H9Y4 310 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 PCTPQ9UKL6 214 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 GRID1Q9ULK0 1009 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 MRPS2Q9Y399 296 aaKnown RBP16.67■□□□□ 0.26
SHMT2-225ENST00000556798 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 PKD1L2Q7Z442 2459 aa16.67■□□□□ 0.26
SHMT2-225ENST00000556798 EPG5Q9HCE0 2579 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 A0A1B0GX78 115 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 DSCR3O14972 297 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 NDUFS4O43181 175 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 PLIN3O60664 434 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 H2AFYO75367 372 aaKnown RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 RPS17P08708 135 aaKnown RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 WT1P19544 449 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 ATP5F1P24539 256 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 NFKB2Q00653 900 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 CASP8Q14790 479 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 FAM214AQ32MH5 1076 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 YOD1Q5VVQ6 348 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 FAM198BQ6UWH4 519 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 MYLK4Q86YV6 388 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 CCDC63Q8NA47 563 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 KCT2Q8NC54 265 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 ZCCHC10Q8TBK6 192 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 PROKR1Q8TCW9 393 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 SLC13A3Q8WWT9 602 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 TM4SF19Q96DZ7 209 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 PTCD3Q96EY7 689 aaKnown RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 TMEM237Q96Q45 408 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 CCNL2Q96S94 520 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms