RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FER1L6-AS2Q96M78 137 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 OR4K3Q96R72 315 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 PHACTR1Q9C0D0 580 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 PCBD2Q9H0N5 130 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 ACBD3Q9H3P7 528 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 CDC42EP4Q9H3Q1 356 aaKnown RBP9.82□□□□□ -0.84
SHMT2-224ENST00000556737 RHOJQ9H4E5 214 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 TMEM184CQ9NVA4 438 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 UTP6Q9NYH9 597 aaKnown RBP9.82□□□□□ -0.84
SHMT2-224ENST00000556737 ZNF451Q9Y4E5 1061 aa9.82□□□□□ -0.84
SHMT2-224ENST00000556737 SETXQ7Z333 2677 aaKnown RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 KCNE1BA0A087WTH5 132 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 A0A0A6YYC8 382 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 A0A1W2PQ72 361 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 TCRBV9S1A1TA0A576 114 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 FAM159BA6NKW6 160 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 I3L1I5 382 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CDC7O00311 574 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 PEX12O00623 359 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 IGHEP01854 428 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ENO2P09104 434 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CDH1P12830 882 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 NPPBP16860 134 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CCND1P24385 295 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 HRH2P25021 359 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 RPS15AP62244 130 aaKnown RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CASP8Q14790 479 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 MYBPC3Q14896 1274 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 VWA2Q5GFL6 755 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 VWA5B1Q5TIE3 1220 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 SLC6A19Q695T7 634 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 C17orf64Q86WR6 236 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ZC3H7AQ8IWR0 971 aaKnown RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 RBMXL3Q8N7X1 1067 aaKnown RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CLEC1AQ8NC01 280 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ABHD11Q8NFV4 315 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 RERGQ96A58 199 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 COL26A1Q96A83 441 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 MIEF2Q96C03 454 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 TM4SF19Q96DZ7 209 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 MACROD1Q9BQ69 325 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 CRB3Q9BUF7 120 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 DRC3Q9H069 523 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 SPNS1Q9H2V7 528 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ZNF552Q9H707 407 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 POPDC3Q9HBV1 291 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 SEMA3GQ9NS98 782 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ARL15Q9NXU5 204 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 NSMCE4AQ9NXX6 385 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 ZNF282Q9UDV7 671 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 NOVA2Q9UNW9 492 aaKnown RBP9.81□□□□□ -0.84
SHMT2-224ENST00000556737 PLAAQ9Y263 795 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 SHANK1Q9Y566 2161 aa9.81□□□□□ -0.84
SHMT2-224ENST00000556737 FEZF1A0PJY2 475 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 PRPF4O43172 522 aaKnown RBP eCLIP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 LCMT2O60294 686 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 GUCA1CO95843 209 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HIST1H2AGP0C0S8 130 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HIST1H2ADP20671 130 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 SAT1P21673 171 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 PHBP35232 272 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HSD17B3P37058 310 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 MLLT10P55197 1068 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 MAT1AQ00266 395 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 KCNC4Q03721 635 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 Q0VFX4 171 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 FAM53BQ14153 422 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 RBBP7Q16576 425 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 SYT16Q17RD7 645 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 TUBB8Q3ZCM7 444 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 PRR30Q53SZ7 412 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 CAPN13Q6MZZ7 669 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 TMEM214Q6NUQ4 689 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 JMJD6Q6NYC1 403 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 TRMT10CQ7L0Y3 403 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HPS6Q86YV9 775 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 PRSS58Q8IYP2 241 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 NKAPQ8N5F7 415 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 GOLGA6L1Q8N7Z2 621 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 OR11G2Q8NGC1 345 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 OR4K1Q8NGD4 311 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 OR9A4Q8NGU2 314 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 NEIL2Q969S2 332 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 ALKBH8Q96BT7 664 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 THAP11Q96EK4 314 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 MMABQ96EY8 250 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HIST1H2AHQ96KK5 128 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 GPR22Q99680 433 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 RBBP8Q99708 897 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HIST1H2AJQ99878 128 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 HAUS8Q9BT25 410 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 H2AFJQ9BTM1 129 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 SARGQ9BW04 601 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 TGIF2Q9GZN2 237 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 CAB39LQ9H9S4 337 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 ZBTB20Q9HC78 741 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 C14orf105Q9NVL8 296 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms