RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 OASLQ15646 514 aaKnown RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 NKG7Q16617 165 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TCTE1Q5JU00 501 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TSTD2Q5T7W7 516 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF324BQ6AW86 544 aaPredicted RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 KIRREL2Q6UWL6 708 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 RAD9BQ6WBX8 426 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 PEX26Q7Z412 305 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 PRSS58Q8IYP2 241 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 OR52K1Q8NGK4 314 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 OR2L8Q8NGY9 312 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 NR4A3Q92570 626 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 HDAC10Q969S8 669 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ZUFSPQ96AP4 578 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 HES6Q96HZ4 224 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TMEM121Q9BTD3 319 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TSSK1BQ9BXA7 367 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 RAB11FIP5Q9BXF6 653 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 LHPPQ9H008 270 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 CRIM1Q9NZV1 1036 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TINAGQ9UJW2 476 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 AMFRQ9UKV5 643 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 R3HDM2Q9Y2K5 976 aaKnown RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 TDRKHQ9Y2W6 561 aaKnown RBP9.54□□□□□ -0.88
SCFD1-220ENST00000556486 HS3ST3B1Q9Y662 390 aa9.54□□□□□ -0.88
SCFD1-220ENST00000556486 ISM1B1AKI9 464 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 RASGRF2O14827 1237 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 SRPX2O60687 465 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PPM1BO75688 479 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 GAS8O95995 478 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 GOT2P00505 430 aaKnown RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 AOAHP28039 575 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PPARGP37231 505 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 FDFT1P37268 417 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 CA7P43166 264 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ART1P52961 327 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 HSPA14Q0VDF9 509 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 GRM7Q14831 915 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 BRD3Q15059 726 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 RBBP7Q16576 425 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 C3AR1Q16581 482 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 CCDC38Q502W7 563 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 AARS2Q5JTZ9 985 aaKnown RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 EXOSC6Q5RKV6 272 aaKnown RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ISLR2Q6UXK2 745 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 SLCO4C1Q6ZQN7 724 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 TTLL10Q6ZVT0 673 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 VRK3Q8IV63 474 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 MPP5Q8N3R9 675 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 SIRT6Q8N6T7 355 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 DNAAF3Q8N9W5 541 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 LMNTD1Q8N9Z9 388 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 OR4L1Q8NH43 312 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 NRGNQ92686 78 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 C8orf44Q96CB5 159 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 VPS50Q96JG6 964 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF778Q96MU6 729 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF160Q9HCG1 818 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PIH1D1Q9NWS0 290 aaKnown RBP9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PTGFRNQ9P2B2 879 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 CTSFQ9UBX1 484 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 SEC14L3Q9UDX4 400 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 PCDHGB6Q9Y5F9 930 aa9.53□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF469Q96JG9 3925 aaPredicted RBP9.52□□□□□ -0.88
SCFD1-220ENST00000556486 NCOA6Q14686 2063 aaPredicted RBP9.52□□□□□ -0.88
SCFD1-220ENST00000556486 IGLV3-12A0A075B6K2 115 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 TCRBV7S2A1N4TA0A589 114 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 PRMT5O14744 637 aaPredicted RBP9.52□□□□□ -0.89
SCFD1-220ENST00000556486 KPNA5O15131 536 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 TBX1O43435 398 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 LIASO43766 372 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 APOA4P06727 396 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 UQCRHP07919 91 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 CELA2AP08217 269 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 MCM3P25205 808 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 TTPAP49638 278 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 NAP1L1P55209 391 aaKnown RBP9.52□□□□□ -0.89
SCFD1-220ENST00000556486 MFAP5Q13361 173 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 SEMA3AQ14563 771 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 FAM214AQ32MH5 1076 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 FCRL6Q6DN72 434 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 FAAH2Q6GMR7 532 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 RPUSD3Q6P087 351 aaKnown RBP9.52□□□□□ -0.89
SCFD1-220ENST00000556486 FIGLAQ6QHK4 219 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 NAPRTQ6XQN6 538 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 LRRC6Q86X45 466 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 TXLNBQ8N3L3 684 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 OR11G2Q8NGC1 345 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 CHTF18Q8WVB6 975 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 RAD51AP1Q96B01 352 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 MTFMTQ96DP5 389 aaKnown RBP9.52□□□□□ -0.89
SCFD1-220ENST00000556486 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 P2RY12Q9H244 342 aa9.52□□□□□ -0.89
SCFD1-220ENST00000556486 CUTCQ9NTM9 273 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms