RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PRMT5O14744 637 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 ZNF189O75820 626 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 METTL18O95568 372 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 PTMAP06454 111 aaKnown RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 TPM3P06753 285 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 CYC1P08574 325 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 DNASE1P24855 282 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 CYB561P49447 251 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 DGKQP52824 942 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 PMPCAQ10713 525 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 PTK6Q13882 451 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 FAM53BQ14153 422 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 SEMA3AQ14563 771 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 P3H1Q32P28 736 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 OR52K1Q8NGK4 314 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 OR51Q1Q8NH59 317 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 PWWP2AQ96N64 755 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 LPAR4Q99677 370 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 OSBPL8Q9BZF1 889 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-219ENST00000556432 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 HCFC1P51610 2035 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 KPNA5O15131 536 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 PSMD3O43242 534 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-219ENST00000556432 PDE9AO76083 593 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 TPM1P09493 284 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 FOSL1P15407 271 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 PSMA3P25788 255 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 CETN2P41208 172 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 MEOX1P50221 254 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 TCEAL1Q15170 157 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 NSDHLQ15738 373 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 TSTD2Q5T7W7 516 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-219ENST00000556432 ICE2Q659A1 982 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 PPP1R21Q6ZMI0 780 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 PLD3Q8IV08 490 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 KLHDC8BQ8IXV7 354 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 ARHGEF39Q8N4T4 335 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 POGLUT1Q8NBL1 392 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 OR5M3Q8NGP4 307 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 OR10Q1Q8NGQ4 319 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 LIME1Q9H400 295 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 EDARQ9UNE0 448 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
ACTN1-219ENST00000556432 H0YIG0 161 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 SGK494L7N484 410 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 HAT1O14929 419 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 HS6ST1O60243 411 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 TJP3O95049 919 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 IL1RNP18510 177 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-219ENST00000556432 TTPAP49638 278 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 OR4D2P58180 307 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 CDH17Q12864 832 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 TRIM14Q14142 442 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ANKRD20A4Q4UJ75 823 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 THEMIS2Q5TEJ8 643 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ACAD11Q709F0 780 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ZNF534Q76KX8 674 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ZZZ3Q8IYH5 903 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 LGI4Q8N135 537 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 MYRIPQ8NFW9 859 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 OR9A1PQ8NGU1 263 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 FAM136AQ96C01 138 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 DLL4Q9NR61 685 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ABHD10Q9NUJ1 306 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-219ENST00000556432 KLF13Q9Y2Y9 288 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-219ENST00000556432 HRH3Q9Y5N1 445 aa13.09□□□□□ -0.31
ACTN1-219ENST00000556432 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 NDUFS3O75489 264 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 CTAG2O75638 210 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 NSA2O95478 260 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 TFEBP19484 476 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ITGA8P53708 1063 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 EIF3BP55884 814 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 NUP107P57740 925 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 SNRPNP63162 240 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 PRDX1Q06830 199 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms