RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 GPR33Q49SQ1 333 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SYTL3Q4VX76 610 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RABL3Q5HYI8 236 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 LYPLAL1Q5VWZ2 237 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 IRGCQ6NXR0 463 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 LRRC8BQ6P9F7 803 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 IYDQ6PHW0 289 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CCNI2Q6ZMN8 369 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CCDC25Q86WR0 208 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 NAGSQ8N159 534 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 KRT222Q8N1A0 295 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 MPP5Q8N3R9 675 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 FBXO39Q8N4B4 442 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 OR10G6Q8NH81 332 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CPT1CQ8TCG5 803 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SLC37A2Q8TED4 501 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CPT1BQ92523 772 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 FAM136AQ96C01 138 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ATXN7L3BQ96GX2 97 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF514Q96K75 400 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 C12orf66Q96MD2 445 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RUNDC3BQ96NL0 473 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 VPS35Q96QK1 796 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 TSSK1BQ9BXA7 367 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 TBC1D10AQ9BXI6 508 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 STRADBQ9C0K7 418 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 IL22Q9GZX6 179 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 VPS37BQ9H9H4 285 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 TCF7L1Q9HCS4 588 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 C20orf96Q9NUD7 363 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ABCF3Q9NUQ8 709 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 IL1RAPL1Q9NZN1 696 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 AKAP7Q9P0M2 348 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CPNE7Q9UBL6 633 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RNF14Q9UBS8 474 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF180Q9UJW8 692 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SATB2Q9UPW6 733 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 NEUROG3Q9Y4Z2 214 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PCDHB1Q9Y5F3 818 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PCDHGA1Q9Y5H4 931 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PRSS21Q9Y6M0 314 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 FAM169AQ9Y6X4 670 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 COL27A1Q8IZC6 1860 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 LY6G6EA0A0G2JKS1 128 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 MGAT4DA6NG13 374 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 IQCF5A8MTL0 148 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 GPR89AB7ZAQ6 455 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 E5RI56 91 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 TMX2-CTNND1H3BSU7 103 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 IFRD1O00458 451 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 GAPDHSO14556 408 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 DNALI1O14645 258 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CHUKO15111 745 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 AKAP10O43572 662 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 NUDT21O43809 227 aaKnown RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 KCNJ13O60928 360 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 TNFSF15O95150 251 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CPNE6O95741 557 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 FTH1P02794 183 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 PROS1P07225 676 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 GP1BAP07359 652 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 F7P08709 466 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 GPR89BP0CG08 455 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 HGFP14210 728 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 XRCC1P18887 633 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 SAT1P21673 171 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CD1CP29017 333 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 APOBEC3AP31941 199 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CSTF2P33240 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 NSG1P42857 185 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 FNTAP49354 379 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CARSP49589 748 aaKnown RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 TTPAP49638 278 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 ITGA8P53708 1063 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 INHBCP55103 352 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 ARL4CP56559 192 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CTXN1P60606 82 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 DGCR2P98153 550 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 B4GALNT1Q00973 533 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 NHLH2Q02577 135 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CKAP4Q07065 602 aaKnown RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 FOXM1Q08050 763 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 HSPA14Q0VDF9 509 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 PDIA2Q13087 525 aaKnown RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CALCOCO2Q13137 446 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 CTBP1Q13363 440 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 MSLNQ13421 630 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 PIN1Q13526 163 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 TSTA3Q13630 321 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 PTK6Q13882 451 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 HLTFQ14527 1009 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATXN3-237ENST00000556274 SEMA3AQ14563 771 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 KCNJ11Q14654 390 aa4.52□□□□□ -1.69
ATXN3-237ENST00000556274 RPE65Q16518 533 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms