RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	THEMIS2	Q5TEJ8	643 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZNF425	Q6IV72	752 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	ARMC6	Q6NXE6	501 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	LETMD1	Q6P1Q0	360 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	SPESP1	Q6UW49	350 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	RBM44	Q6ZP01	1051 aa	Known RBP	10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	SPRED1	Q7Z699	444 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	PLXDC1	Q8IUK5	500 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	LRRC34	Q8IZ02	419 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZNF781	Q8N8C0	355 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	OR4F6	Q8NGB9	312 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	STON2	Q8WXE9	905 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	JPH3	Q8WXH2	748 aa	Predicted RBP	10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	UBE2E3	Q969T4	207 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZDHHC12	Q96GR4	267 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	SEC16B	Q96JE7	1060 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	CCDC3	Q9BQI4	270 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	SIKE1	Q9BRV8	207 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	SYNDIG1	Q9H7V2	258 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	TNFRSF12A	Q9NP84	129 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	MRPS30	Q9NP92	439 aa	Known RBP	10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	C1GALT1	Q9NS00	363 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	PDP2	Q9P2J9	529 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	TAC3	Q9UHF0	121 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	POMT2	Q9UKY4	750 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	RNF11	Q9Y3C5	154 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	PCDHGA11	Q9Y5H2	935 aa		10.86	□□□□□ -0.67
RAD51B-222	ENST00000555907	MYO18B	Q8IUG5	2567 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	IGKV1-8	A0A0C4DH67	115 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907		E7EQ34	232 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZNF195	O14628	629 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	HGS	O14964	777 aa	Predicted RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	OR4F21	O95013	312 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	HGF	P14210	728 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ALOX15	P16050	662 aa	Predicted RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	TYRP1	P17643	537 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	DRD4	P21917	467 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ALDH4A1	P30038	563 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	GRIA3	P42263	894 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	LSS	P48449	732 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	SEC24C	P53992	1094 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	CSNK1G2	P78368	415 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	SPIDR	Q14159	915 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	C3orf38	Q5JPI3	329 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	CATSPERE	Q5SY80	951 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	KANK2	Q63ZY3	851 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	HIST2H2AA3	Q6FI13	130 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	GRHL2	Q6ISB3	625 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	FAM47E	Q6ZV65	393 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	PAQR7	Q86WK9	346 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZNF761	Q86XN6	746 aa	Predicted RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	LAS2	Q8IYD9	372 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	AFAP1L2	Q8N4X5	818 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	WDR48	Q8TAF3	677 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	METTL6	Q8TCB7	284 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	RSC1A1	Q92681	617 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	USP7	Q93009	1102 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	CCDC74A	Q96AQ1	378 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	AIF1L	Q9BQI0	150 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	PLCD4	Q9BRC7	762 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ACAT2	Q9BWD1	397 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	RHBG	Q9H310	441 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	SEMA6C	Q9H3T2	930 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ACTR8	Q9H981	624 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	PFDN4	Q9NQP4	134 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	PNPO	Q9NVS9	261 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ADGRE2	Q9UHX3	823 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	PPT2	Q9UMR5	302 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	SH2B3	Q9UQQ2	575 aa		10.85	□□□□□ -0.67
RAD51B-222	ENST00000555907	MGA	Q8IWI9	3026 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	COL6A6	A6NMZ7	2263 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907		A0A0J9YY10	115 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	GSAP	A4D1B5	854 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	OR2A25	A4D2G3	310 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907		H7BY64	318 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	HDAC3	O15379	428 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	TOX3	O15405	576 aa	Predicted RBP	10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	DUX1	O43812	170 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	WISP1	O95388	367 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	KRT6A	P02538	564 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	KRT6B	P04259	564 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	CAPN1	P07384	714 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	CDH1	P12830	882 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	CD22	P20273	847 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	MPST	P25325	297 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	PSMB5	P28074	263 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	GSTM2	P28161	218 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	SERPINB1	P30740	379 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	KRT6C	P48668	564 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	YBX1	P67809	324 aa	Known RBP	10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	REEP5	Q00765	189 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	NFATC3	Q12968	1075 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	TSTA3	Q13630	321 aa	Predicted RBP	10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	SH2D4B	Q5SQS7	431 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	TMEM71	Q6P5X7	295 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	FIGLA	Q6QHK4	219 aa		10.84	□□□□□ -0.67
RAD51B-222	ENST00000555907	TRIM46	Q7Z4K8	759 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms